StrainFLAIR: strain-level profiling of metagenomic samples using variation graphs

Current studies are shifting from the use of single linear references to representation of multiple genomes organised in pangenome graphs or variation graphs. Meanwhile, in metagenomic samples, resolving strain-level abundances is a major step in microbiome studies, as associations between strain va...

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Dades bibliogràfiques

Autors principals:	Kévin Da Silva, Nicolas Pons, Magali Berland, Florian Plaza Oñate, Mathieu Almeida, Pierre Peterlongo
Format:	Artigo
Idioma:	Inglês
Publicat:	PeerJ Inc. 2021-08-01
Col·lecció:	PeerJ
Matèries:	Metagenomics Variation graphs Strain-level abundances Read mapping
Accés en línia:	https://peerj.com/articles/11884.pdf
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