PyDamage: automated ancient damage identification and estimation for contigs in ancient DNA de novo assembly

DNA de novo assembly can be used to reconstruct longer stretches of DNA (contigs), including genes and even genomes, from short DNA sequencing reads. Applying this technique to metagenomic data derived from archaeological remains, such as paleofeces and dental calculus, we can investigate past micro...

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Bibliografski detalji

Glavni autori:	Maxime Borry, Alexander Hübner, Adam B. Rohrlach, Christina Warinner
Format:	Artigo
Jezik:	Inglês
Izdano:	PeerJ Inc. 2021-07-01
Serija:	PeerJ
Teme:	metagenomics aDNA ancient DNA assembly damage de novo
Online pristup:	https://peerj.com/articles/11845.pdf
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