macpie: Scalable workflow for high-throughput transcriptomic profiling

High-throughput transcriptomic profiling (HTTr) enables scalable characterisation of transcriptional responses to chemical and genetic perturbations. While plate-based technologies such as MAC-Seq, TempO-seq and PLATE-seq have made HTTr more accessible, they pose unique computational challenges for...

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Bibliographic Details

Main Authors:	Nenad Bartonicek, Xin Liu, Laura Twomey, Michelle Meier, Richard Lupat, Stuart Craig, David Yoannidis, Jason Li, Tim Semple, Kaylene J. Simpson, Mark X. Li, Susanne Ramm
Format:	Artigo
Language:	Inglês
Published:	Elsevier 2025-01-01
Series:	Computational and Structural Biotechnology Journal
Subjects:	High-throughput transcriptomics Plate-based screens Data integration Software
Online Access:	http://www.sciencedirect.com/science/article/pii/S200103702500474X
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