K-mer-based machine learning method to classify LTR-retrotransposons in plant genomes

Every day more plant genomes are available in public databases and additional massive sequencing projects (i.e., that aim to sequence thousands of individuals) are formulated and released. Nevertheless, there are not enough automatic tools to analyze this large amount of genomic information. LTR ret...

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Auteurs principaux:	Simon Orozco-Arias, Mariana S. Candamil-Cortés, Paula A. Jaimes, Johan S. Piña, Reinel Tabares-Soto, Romain Guyot, Gustavo Isaza
Format:	Artigo
Langue:	Inglês
Publié:	PeerJ Inc. 2021-05-01
Collection:	PeerJ
Sujets:	Transposable elements LTR retrotransposons Plant genomes Machine learning Classification Free-alignment approach
Accès en ligne:	https://peerj.com/articles/11456.pdf
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