Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time

por van Dijk, Aalt D.J., Molenaar, Jaap
Publicado en PeerJ (2017)

An interactomics overview of the human and bovine milk proteome over lactation

por Zhang, Lina, van Dijk, Aalt D. J., Hettinga, Kasper
Publicado en Proteome Sci (2017)

Interactome-Wide Prediction of Protein-Protein Binding Sites Reveals Effects of Protein Sequence Variation in Arabidopsis thaliana

por Leal Valentim, Felipe, Neven, Frank, Boyen, Peter, van Dijk, Aalt D. J.
Publicado 2012

Selected proceedings of Machine Learning in Systems Biology: MLSB 2016

por van Dijk, Aalt D. J., Lähdesmäki, Harri, de Ridder, Dick, Rousu, Juho
Publicado en BMC Bioinformatics (2016)

Similarities between plant traits based on their connection to underlying gene functions

por Nap, Jan-Peter, Sanchez-Perez, Gabino F., van Dijk, Aalt D. J.
Publicado en PLoS One (2017)

Caretta – A multiple protein structure alignment and feature extraction suite

por Akdel, Mehmet, Durairaj, Janani, de Ridder, Dick, van Dijk, Aalt D.J.
Publicado en Comput Struct Biotechnol J (2020)

Mutational Robustness of Gene Regulatory Networks

por van Dijk, Aalt D. J., van Mourik, Simon, van Ham, Roeland C. H. J.
Publicado 2012

Inferring the Gene Network Underlying the Branching of Tomato Inflorescence

por Astola, Laura, Stigter, Hans, van Dijk, Aalt D. J., van Daelen, Raymond, Molenaar, Jaap
Publicado 2014

Structural determinants of DNA recognition by plant MADS-domain transcription factors

por Muiño, Jose M., Smaczniak, Cezary, Angenent, Gerco C., Kaufmann, Kerstin, van Dijk, Aalt D.J.
Publicado 2014

Divergent regulation of Arabidopsis SAUR genes: a focus on the SAUR10-clade

por van Mourik, Hilda, van Dijk, Aalt D. J., Stortenbeker, Niek, Angenent, Gerco C., Bemer, Marian
Publicado en BMC Plant Biol (2017)

PRI-CAT: a web-tool for the analysis, storage and visualization of plant ChIP-seq experiments

por Muiño, Jose M., Hoogstraat, Marlous, van Ham, Roeland C. H. J., van Dijk, Aalt D. J.
Publicado 2011

Comparative analysis of binding patterns of MADS-domain proteins in Arabidopsis thaliana

por Aerts, Niels, de Bruijn, Suzanne, van Mourik, Hilda, Angenent, Gerco C., van Dijk, Aalt D. J.
Publicado en BMC Plant Biol (2018)

Information-driven protein–DNA docking using HADDOCK: it is a matter of flexibility

por van Dijk, Marc, van Dijk, Aalt D. J., Hsu, Victor, Boelens, Rolf, Bonvin, Alexandre M. J. J.
Publicado 2006

Integrating two patterning processes in the flower

por van Mourik, Simon, van Dijk, Aalt D.J., Angenent, Gerco C., Merk, Roeland M.H., Molenaar, Jaap
Publicado 2012

Integrating structure-based machine learning and co-evolution to investigate specificity in plant sesquiterpene synthases

por Durairaj, Janani, Melillo, Elena, Bouwmeester, Harro J., Beekwilder, Jules, de Ridder, Dick, van Dijk, Aalt D. J.
Publicado en PLoS Comput Biol (2021)

Simulation of Organ Patterning on the Floral Meristem Using a Polar Auxin Transport Model

por van Mourik, Simon, Kaufmann, Kerstin, van Dijk, Aalt D. J., Angenent, Gerco C., Merks, Roeland M. H., Molenaar, Jaap
Publicado 2012

Genome-Wide Computational Function Prediction of Arabidopsis Proteins by Integration of Multiple Data Sources(1)([C])([W])([OA])

por Kourmpetis, Yiannis A.I., van Dijk, Aalt D.J., van Ham, Roeland C.H.J., ter Braak, Cajo J.F.
Publicado 2011

Sequence Motifs in MADS Transcription Factors Responsible for Specificity and Diversification of Protein-Protein Interaction

por van Dijk, Aalt D. J., Morabito, Giuseppa, Fiers, Martijn, van Ham, Roeland C. H. J., Angenent, Gerco C., Immink, Richard G. H.
Publicado 2010

Predicting the Impact of Alternative Splicing on Plant MADS Domain Protein Function

por Severing, Edouard I., van Dijk, Aalt D. J., Morabito, Giuseppa, Busscher-Lange, Jacqueline, Immink, Richard G. H., van Ham, Roeland C. H. J.
Publicado 2012

Prior Biological Knowledge Improves Genomic Prediction of Growth-Related Traits in Arabidopsis thaliana

por Farooq, Muhammad, van Dijk, Aalt D. J., Nijveen, Harm, Aarts, Mark G. M., Kruijer, Willem, Nguyen, Thu-Phuong, Mansoor, Shahid, de Ridder, Dick
Publicado en Front Genet (2021)