Generation, functional annotation and comparative analysis of black spruce (Picea mariana) ESTs: an important conifer genomic resource

Por Mann, Ishminder K, Wegrzyn, Jill L, Rajora, Om P
Publicado em 2013

Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites

Por Wegrzyn, Jill L, Drudge, Thomas M, Valafar, Faramarz, Hook, Vivian
Publicado em 2008

PineSAP—sequence alignment and SNP identification pipeline

Por Wegrzyn, Jill L., Lee, Jennifer M., Liechty, John, Neale, David B.
Publicado em 2009

TreeGenes: A Forest Tree Genome Database

Por Wegrzyn, Jill L., Lee, Jennifer M., Tearse, Brandon R., Neale, David B.
Publicado em 2008

Open access to tree genomes: the path to a better forest

Por Neale, David B, Langley, Charles H, Salzberg, Steven L, Wegrzyn, Jill L
Publicado em 2013

Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome

Por Visser, Erik A., Wegrzyn, Jill L., Steenkmap, Emma T., Myburg, Alexander A., Naidoo, Sanushka
Publicado no BMC Genomics (2015)

Contrasting patterns of nucleotide diversity for four conifers of Alpine European forests

Por Mosca, Elena, Eckert, Andrew J, Liechty, John D, Wegrzyn, Jill L, La Porta, Nicola, Vendramin, Giovanni G, Neale, David B
Publicado em 2012

Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles

Por Cronn, Richard, Dolan, Peter C., Jogdeo, Sanjuro, Wegrzyn, Jill L., Neale, David B., St. Clair, J. Bradley, Denver, Dee R.
Publicado no BMC Genomics (2017)

Patterns of Population Structure and Environmental Associations to Aridity Across the Range of Loblolly Pine (Pinus taeda L., Pinaceae)

Por Eckert, Andrew J., van Heerwaarden, Joost, Wegrzyn, Jill L., Nelson, C. Dana, Ross-Ibarra, Jeffrey, González-Martínez, Santíago C., Neale, David. B.
Publicado em 2010

Association Genetics of Coastal Douglas Fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-Hardiness Related Traits

Por Eckert, Andrew J., Bower, Andrew D., Wegrzyn, Jill L., Pande, Barnaly, Jermstad, Kathleen D., Krutovsky, Konstantin V., St. Clair, J. Bradley, Neale, David B.
Publicado em 2009

Proteomics of Dense Core Secretory Vesicles Reveal Distinct Protein Categories for Secretion of Neuroeffectors for Cell-Cell Communication

Por Wegrzyn, Jill L., Bark, Steven J., Funkelstein, Lydiane, Mosier, Charles, Yap, Angel, Kazemi-Esfarjani, Parasa, La Spada, Albert, Sigurdson, Christina, O’Connor, Daniel T., Hook, Vivian
Publicado em 2010

Multilocus Patterns of Nucleotide Diversity and Divergence Reveal Positive Selection at Candidate Genes Related to Cold Hardiness in Coastal Douglas Fir (Pseudotsuga menziesii var....

Por Eckert, Andrew J., Wegrzyn, Jill L., Pande, Barnaly, Jermstad, Kathleen D., Lee, Jennifer M., Liechty, John D., Tearse, Brandon R., Krutovsky, Konstantin V., Neale, David B.
Publicado em 2009

Association Mapping of Quantitative Disease Resistance in a Natural Population of Loblolly Pine (Pinus taeda L.)

Por Quesada, Tania, Gopal, Vikneswaran, Cumbie, W. Patrick, Eckert, Andrew J., Wegrzyn, Jill L., Neale, David B., Goldfarb, Barry, Huber, Dudley A., Casella, George, Davis, John M.
Publicado em 2010

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

Por Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Publicado no Gigascience (2017)

Erratum to: An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

Por Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Publicado no Gigascience (2017)

The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences

Por Kovach, Allen, Wegrzyn, Jill L, Parra, Genis, Holt, Carson, Bruening, George E, Loopstra, Carol A, Hartigan, James, Yandell, Mark, Langley, Charles H, Korf, Ian, Neale, David B
Publicado em 2010

Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana)

Por Gonzalez-Ibeas, Daniel, Martinez-Garcia, Pedro J., Famula, Randi A., Delfino-Mix, Annette, Stevens, Kristian A., Loopstra, Carol A., Langley, Charles H., Neale, David B., Wegrzyn, Jill L.
Publicado no G3 (Bethesda) (2016)

ChloroMitoCU: Codon patterns across organelle genomes for functional genomics and evolutionary applications

Por Sablok, Gaurav, Chen, Ting-Wen, Lee, Chi-Ching, Yang, Chi, Gan, Ruei-Chi, Wegrzyn, Jill L., Porta, Nicola L., Nayak, Kinshuk C., Huang, Po-Jung, Varotto, Claudio, Tang, Petrus
Publicado no DNA Res (2017)

The Evolutionary Genetics of the Genes Underlying Phenotypic Associations for Loblolly Pine (Pinus taeda, Pinaceae)

Por Eckert, Andrew J., Wegrzyn, Jill L., Liechty, John D., Lee, Jennifer M., Cumbie, W. Patrick, Davis, John M., Goldfarb, Barry, Loopstra, Carol A., Palle, Sreenath R., Quesada, Tania, Langley, Charles H., Neale, David B.
Publicado em 2013

Sequencing and Assembly of the 22-Gb Loblolly Pine Genome

Por Zimin, Aleksey, Stevens, Kristian A., Crepeau, Marc W., Holtz-Morris, Ann, Koriabine, Maxim, Marçais, Guillaume, Puiu, Daniela, Roberts, Michael, Wegrzyn, Jill L., de Jong, Pieter J., Neale, David B., Salzberg, Steven L., Yorke, James A., Langley, Charles H.
Publicado em 2014