Malaria Genomics in the Era of Eradication

par Neafsey, Daniel E., Volkman, Sarah K.
Publié dans Cold Spring Harb Perspect Med (2017)

Pre-amplification methods for tracking low-grade Plasmodium falciparum populations during scaled-up interventions in Southern Zambia

par Mharakurwa, Sungano, Daniels, Rachel, Scott, Alan, Wirth, Dyann F, Thuma, Philip, Volkman, Sarah K
Publié 2014

The utility of genomic data for Plasmodium vivax population surveillance

par Daniels, Rachel F., Rice, Benjamin L., Daniels, Noah M., Volkman, Sarah K., Hartl, Daniel L.
Publié dans Pathog Glob Health (2015)

Genetic background and PfKelch13 affect artemisinin susceptibility of PfCoronin mutants in Plasmodium falciparum

par Sharma, Aabha I., Shin, Sara H., Bopp, Selina, Volkman, Sarah K., Hartl, Daniel L., Wirth, Dyann F.
Publié dans PLoS Genet (2020)

Low-Complexity Regions in Plasmodium falciparum: Missing Links in the Evolution of an Extreme Genome

par Zilversmit, Martine M., Volkman, Sarah K., DePristo, Mark A., Wirth, Dyann F., Awadalla, Philip, Hartl, Daniel L.
Publié 2010

Methods to Increase the Sensitivity of High Resolution Melting Single Nucleotide Polymorphism Genotyping in Malaria

par Daniels, Rachel, Hamilton, Elizabeth J., Durfee, Katelyn, Ndiaye, Daouda, Wirth, Dyann F., Hartl, Daniel L., Volkman, Sarah K.
Publié dans J Vis Exp (2015)

An Adjustable Gas-Mixing Device to Increase Feasibility of In Vitro Culture of Plasmodium falciparum Parasites in the Field

par Bei, Amy K., Patel, Saurabh D., Volkman, Sarah K., Ahouidi, Ambroise D., Ndiaye, Daouda, Mboup, Souleymane, Wirth, Dyann F.
Publié 2014

Genetic evidence that the Makira region in northeastern Madagascar is a hotspot of malaria transmission

par Rice, Benjamin L., Golden, Christopher D., Anjaranirina, Evelin Jean Gasta, Botelho, Carolina Mastella, Volkman, Sarah K., Hartl, Daniel L.
Publié dans Malar J (2016)

Case report of Plasmodium ovale curtisi malaria in Sri Lanka: relevance for the maintenance of elimination status

par Gunawardena, Sharmini, Daniels, Rachel F., Yahathugoda, Thishan C., Weerasooriya, Mirani V., Durfee, Katelyn, Volkman, Sarah K., Wirth, Dyann F., Karunaweera, Nadira D.
Publié dans BMC Infect Dis (2017)

Rapid, Field-Deployable Method for Genotyping and Discovery of Single-Nucleotide Polymorphisms Associated with Drug Resistance in Plasmodium falciparum

par Daniels, Rachel, Ndiaye, Daouda, Wall, Mikeal, McKinney, Jason, Séne, Papa Diogoye, Sabeti, Pardis C., Volkman, Sarah K., Mboup, Souleymane, Wirth, Dyann F.
Publié 2012

Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing

par Early, Angela M., Daniels, Rachel F., Farrell, Timothy M., Grimsby, Jonna, Volkman, Sarah K., Wirth, Dyann F., MacInnis, Bronwyn L., Neafsey, Daniel E.
Publié dans Malar J (2019)

Genetic diversity of Plasmodium falciparum in Grande Comore Island

par Papa Mze, Nasserdine, Bogreau, Hervé, Diedhiou, Cyrille K., Herdell, Vendela, Rahamatou, Silai, Bei, Amy K., Volkman, Sarah K., Basco, Leonardo, Mboup, Souleymane, Ahouidi, Ambroise D.
Publié dans Malar J (2020)

Genomic heterogeneity in the density of noncoding single-nucleotide and microsatellite polymorphisms in Plasmodium falciparum

par Volkman, Sarah K., Lozovsky, Elena, Barry, Alyssa E., Bedford, Trevor, Bethke, Lara, Myrick, Alissa, Day, Karen P., Hartl, Daniel L., Wirth, Dyann F., Sawyer, Stanley A.
Publié 2006

Molecular Epidemiology of Plasmodium falciparum kelch13 Mutations in Senegal Determined by Using Targeted Amplicon Deep Sequencing

par Talundzic, Eldin, Ndiaye, Yaye D., Deme, Awa B., Olsen, Christian, Patel, Dhruviben S., Biliya, Shweta, Daniels, Rachel, Vannberg, Fredrik O., Volkman, Sarah K., Udhayakumar, Venkatachalam, Ndiaye, Daouda
Publié dans Antimicrob Agents Chemother (2017)

De Novo Mutations Resolve Disease Transmission Pathways in Clonal Malaria

par Redmond, Seth N, MacInnis, Bronwyn M, Bopp, Selina, Bei, Amy K, Ndiaye, Daouda, Hartl, Daniel L, Wirth, Dyann F, Volkman, Sarah K, Neafsey, Daniel E
Publié dans Mol Biol Evol (2018)

Application of Genomics to Field Investigations of Malaria by the International Centers for Excellence in Malaria Research

par Volkman, Sarah K., Ndiaye, Daouda, Diakite, Mahamadou, Koita, Ousmane, Nwakanma, Davis, Daniels, Rachel, Park, Danny, Neafsey, Dan, Muskavitch, Marc, Krogstad, Don, Sabeti, Pardis, Hartl, Dan, Wirth, Dyann
Publié 2011

Malaria prevalence, prevention and treatment seeking practices among nomadic pastoralists in northern Senegal

par Seck, Mame Cheikh, Thwing, Julie, Fall, Fatou Ba, Gomis, Jules Francois, Deme, Awa, Ndiaye, Yaye Die, Daniels, Rachel, Volkman, Sarah K., Ndiop, Medoune, Ba, Mady, Ndiaye, Daouda
Publié dans Malar J (2017)

Mutations in Plasmodium falciparum actin-binding protein coronin confer reduced artemisinin susceptibility

par Demas, Allison R., Sharma, Aabha I., Wong, Wesley, Early, Angela M., Redmond, Seth, Bopp, Selina, Neafsey, Daniel E., Volkman, Sarah K., Hartl, Daniel L., Wirth, Dyann F.
Publié dans Proc Natl Acad Sci U S A (2018)

Malaria life cycle intensifies both natural selection and random genetic drift

par Chang, Hsiao-Han, Moss, Eli L., Park, Daniel J., Ndiaye, Daouda, Mboup, Souleymane, Volkman, Sarah K., Sabeti, Pardis C., Wirth, Dyann F., Neafsey, Daniel E., Hartl, Daniel L.
Publié 2013

Population genomics of Plasmodium vivax in Panama to assess the risk of case importation on malaria elimination

par Buyon, Lucas E., Santamaria, Ana Maria, Early, Angela M., Quijada, Mario, Barahona, Itza, Lasso, Jose, Avila, Mario, Volkman, Sarah K., Marti, Matthias, Neafsey, Daniel E., Obaldia III, Nicanor
Publié dans PLoS Negl Trop Dis (2020)