Speeding up the Consensus Clustering methodology for microarray data analysis

Por Giancarlo, Raffaele, Utro, Filippo
Publicado em 2011

Computational cluster validation for microarray data analysis: experimental assessment of Clest, Consensus Clustering, Figure of Merit, Gap Statistics and Model Explorer

Por Giancarlo, Raffaele, Scaturro, Davide, Utro, Filippo
Publicado em 2008

Sum of parts is greater than the whole: inference of common genetic history of populations

Por Utro, Filippo, Pybus, Marc, Parida, Laxmi
Publicado em 2013

A basic analysis toolkit for biological sequences

Por Siragusa Enrico, Siragusa Alessandro, Giancarlo Raffaele, Utro Filippo
Publicado em 2007-09-01

A basic analysis toolkit for biological sequences

Por Giancarlo, Raffaele, Siragusa, Alessandro, Siragusa, Enrico, Utro, Filippo
Publicado em 2007

A methodology to assess the intrinsic discriminative ability of a distance function and its interplay with clustering algorithms for microarray data analysis

Por Giancarlo, Raffaele, Lo Bosco, Giosué, Pinello, Luca, Utro, Filippo
Publicado em 2013

ARG-based genome-wide analysis of cacao cultivars

Por Utro Filippo, Cornejo Omar, Livingstone Donald, Motamayor Juan, Parida Laxmi
Publicado em 2012-12-01

ARG-based genome-wide analysis of cacao cultivars

Por Utro, Filippo, Cornejo, Omar Eduardo, Livingstone, Donald, Motamayor, Juan Carlos, Parida, Laxmi
Publicado em 2012

Driver gene classification reveals a substantial overrepresentation of tumor suppressors among very large chromatin-regulating proteins

Por Waks, Zeev, Weissbrod, Omer, Carmeli, Boaz, Norel, Raquel, Utro, Filippo, Goldschmidt, Yaara
Publicado no Sci Rep (2016)

iXora: exact haplotype inferencing and trait association

Por Utro, Filippo, Haiminen, Niina, Livingstone, Donald, Cornejo, Omar E, Royaert, Stefan, Schnell, Raymond J, Motamayor, Juan Carlos, Kuhn, David N, Parida, Laxmi
Publicado em 2013

Comparative exomics of Phalaris cultivars under salt stress

Por Haiminen, Niina, Klaas, Manfred, Zhou, Zeyu, Utro, Filippo, Cormican, Paul, Didion, Thomas, Jensen, Christian Sig, Mason, Christopher E, Barth, Susanne, Parida, Laxmi
Publicado no BMC Genomics (2014)

Genetic Inactivation of the PRC2 Complex in T-Cell Acute Lymphoblastic Leukemia

Por Ntziachristos, Panagiotis, Tsirigos, Aristotelis, Van Vlierberghe, Pieter, Nedjic, Jelena, Trimarchi, Thomas, Flaherty, Maria Sol, Ferres-Marco, Dolors, da Ros, Vanina, Tang, Zuojian, Siegle, Jasmin, Asp, Patrik, Hadler, Michael, Rigo, Isaura, De Keersmaecker, Kim, Patel, Jay, Huynh, Tien, Utro, Filippo, Poglio, Sandrine, Samon, Jeremy B., Paietta, Elisabeth, Racevskis, Janis, Rowe, Jacob M., Rabadan, Raul, Levine, Ross L., Brown, Stuart, Pflumio, Francoise, Dominguez, Maria, Ferrando, Adolfo, Aifantis, Iannis
Publicado em 2012

Comparing sequencing assays and human-machine analyses in actionable genomics for glioblastoma

Por Wrzeszczynski, Kazimierz O., Frank, Mayu O., Koyama, Takahiko, Rhrissorrakrai, Kahn, Robine, Nicolas, Utro, Filippo, Emde, Anne-Katrin, Chen, Bo-Juen, Arora, Kanika, Shah, Minita, Vacic, Vladimir, Norel, Raquel, Bilal, Erhan, Bergmann, Ewa A., Moore Vogel, Julia L., Bruce, Jeffrey N., Lassman, Andrew B., Canoll, Peter, Grommes, Christian, Harvey, Steve, Parida, Laxmi, Michelini, Vanessa V., Zody, Michael C., Jobanputra, Vaidehi, Royyuru, Ajay K., Darnell, Robert B.
Publicado no Neurol Genet (2017)

Enhancing Next‐Generation Sequencing‐Guided Cancer Care Through Cognitive Computing

Por Patel, Nirali M., Michelini, Vanessa V., Snell, Jeff M., Balu, Saianand, Hoyle, Alan P., Parker, Joel S., Hayward, Michele C., Eberhard, David A., Salazar, Ashley H., McNeillie, Patrick, Xu, Jia, Huettner, Claudia S., Koyama, Takahiko, Utro, Filippo, Rhrissorrakrai, Kahn, Norel, Raquel, Bilal, Erhan, Royyuru, Ajay, Parida, Laxmi, Earp, H. Shelton, Grilley‐Olson, Juneko E., Hayes, D. Neil, Harvey, Stephen J., Sharpless, Norman E., Kim, William Y.
Publicado no Oncologist (2017)

The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color

Por Motamayor, Juan C, Mockaitis, Keithanne, Schmutz, Jeremy, Haiminen, Niina, III, Donald Livingstone, Cornejo, Omar, Findley, Seth D, Zheng, Ping, Utro, Filippo, Royaert, Stefan, Saski, Christopher, Jenkins, Jerry, Podicheti, Ram, Zhao, Meixia, Scheffler, Brian E, Stack, Joseph C, Feltus, Frank A, Mustiga, Guiliana M, Amores, Freddy, Phillips, Wilbert, Marelli, Jean Philippe, May, Gregory D, Shapiro, Howard, Ma, Jianxin, Bustamante, Carlos D, Schnell, Raymond J, Main, Dorrie, Gilbert, Don, Parida, Laxmi, Kuhn, David N
Publicado em 2013