A Framework for Effective Application of Machine Learning to Microbiome-Based Classification Problems

Autor Topçuoğlu, Begüm D., Lesniak, Nicholas A., Ruffin, Mack T., Wiens, Jenna, Schloss, Patrick D.
Vydáno v mBio (2020)

Growth Kinetics, Carbon Isotope Fractionation, and Gene Expression in the Hyperthermophile Methanocaldococcus jannaschii during Hydrogen-Limited Growth and Interspecies Hydrogen Tr...

Autor Topçuoğlu, Begüm D., Meydan, Cem, Nguyen, Tran B., Lang, Susan Q., Holden, James F.
Vydáno v Appl Environ Microbiol (2019)

Fecal Short-Chain Fatty Acids Are Not Predictive of Colonic Tumor Status and Cannot Be Predicted Based on Bacterial Community Structure

Autor Sze, Marc A., Topçuoğlu, Begüm D., Lesniak, Nicholas A., Ruffin, Mack T., Schloss, Patrick D.
Vydáno v mBio (2019)

Women Are Underrepresented and Receive Differential Outcomes at ASM Journals: a Six-Year Retrospective Analysis

Autor Hagan, Ada K., Topçuoğlu, Begüm D., Gregory, Mia E., Barton, Hazel A., Schloss, Patrick D.
Vydáno v mBio (2020)

Erratum for Hagan et al., “Women Are Underrepresented and Receive Differential Outcomes at ASM Journals: a Six-Year Retrospective Analysis”

Autor Hagan, Ada K., Topçuoğlu, Begüm D., Gregory, Mia E., Barton, Hazel A., Schloss, Patrick D.
Vydáno v mBio (2021)

Hydrogen Limitation and Syntrophic Growth among Natural Assemblages of Thermophilic Methanogens at Deep-sea Hydrothermal Vents

Autor Topçuoğlu, Begüm D., Stewart, Lucy C., Morrison, Hilary G., Butterfield, David A., Huber, Julie A., Holden, James F.
Vydáno v Front Microbiol (2016)

Long-term forest soil warming alters microbial communities in temperate forest soils

Autor DeAngelis, Kristen M., Pold, Grace, Topçuoğlu, Begüm D., van Diepen, Linda T. A., Varney, Rebecca M., Blanchard, Jeffrey L., Melillo, Jerry, Frey, Serita D.
Vydáno v Front Microbiol (2015)

Seafloor Incubation Experiment with Deep-Sea Hydrothermal Vent Fluid Reveals Effect of Pressure and Lag Time on Autotrophic Microbial Communities

Autor Fortunato, Caroline S., Butterfield, David A., Larson, Benjamin, Lawrence-Slavas, Noah, Algar, Christopher K., Zeigler Allen, Lisa, Holden, James F., Proskurowski, Giora, Reddington, Emily, Stewart, Lucy C., Topçuoğlu, Begüm D., Vallino, Joseph J., Huber, Julie A.
Vydáno v Appl Environ Microbiol (2021)

Ten simple rules to increase computational skills among biologists with Code Clubs

Autor Hagan, Ada K., Lesniak, Nicholas A., Balunas, Marcy J., Bishop, Lucas, Close, William L., Doherty, Matthew D., Elmore, Amanda G., Flynn, Kaitlin J., Hannigan, Geoffrey D., Koumpouras, Charlie C., Jenior, Matthew L., Kozik, Ariangela J., McBride, Kathryn, Rifkin, Samara B., Stough, Joshua M. A., Sovacool, Kelly L., Sze, Marc A., Tomkovich, Sarah, Topcuoglu, Begum D., Schloss, Patrick D.
Vydáno v PLoS Comput Biol (2020)