MUCHA: multiple chemical alignment algorithm to identify building block substructures of orphan secondary metabolites

Por Kotera, Masaaki, Tokimatsu, Toshiaki, Kanehisa, Minoru, Goto, Susumu
Publicado em 2011

Supervised de novo reconstruction of metabolic pathways from metabolome-scale compound sets

Por Kotera, Masaaki, Tabei, Yasuo, Yamanishi, Yoshihiro, Tokimatsu, Toshiaki, Goto, Susumu
Publicado em 2013

A physiological role for oxalic acid biosynthesis in the wood-rotting basidiomycete Fomitopsis palustris

Por Munir, Erman, Yoon, Jeong Jun, Tokimatsu, Toshiaki, Hattori, Takefumi, Shimada, Mikio
Publicado em 2001

Modular Architecture of Metabolic Pathways Revealed by Conserved Sequences of Reactions

Por Muto, Ai, Kotera, Masaaki, Tokimatsu, Toshiaki, Nakagawa, Zenichi, Goto, Susumu, Kanehisa, Minoru
Publicado em 2013

PathPred: an enzyme-catalyzed metabolic pathway prediction server

Por Moriya, Yuki, Shigemizu, Daichi, Hattori, Masahiro, Tokimatsu, Toshiaki, Kotera, Masaaki, Goto, Susumu, Kanehisa, Minoru
Publicado em 2010

Metabolome-scale prediction of intermediate compounds in multistep metabolic pathways with a recursive supervised approach

Por Kotera, Masaaki, Tabei, Yasuo, Yamanishi, Yoshihiro, Muto, Ai, Moriya, Yuki, Tokimatsu, Toshiaki, Goto, Susumu
Publicado em 2014

KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics

Por Kotera, Masaaki, Tabei, Yasuo, Yamanishi, Yoshihiro, Moriya, Yuki, Tokimatsu, Toshiaki, Kanehisa, Minoru, Goto, Susumu
Publicado em 2013

KaPPA-View. A Web-Based Analysis Tool for Integration of Transcript and Metabolite Data on Plant Metabolic Pathway Maps

Por Tokimatsu, Toshiaki, Sakurai, Nozomu, Suzuki, Hideyuki, Ohta, Hiroyuki, Nishitani, Kazuhiko, Koyama, Tanetoshi, Umezawa, Toshiaki, Misawa, Norihiko, Saito, Kazuki, Shibata, Daisuke
Publicado em 2005

Data integration aids understanding of butterfly–host plant networks

Por Muto-Fujita, Ai, Takemoto, Kazuhiro, Kanaya, Shigehiko, Nakazato, Takeru, Tokimatsu, Toshiaki, Matsumoto, Natsushi, Kono, Mayo, Chubachi, Yuko, Ozaki, Katsuhisa, Kotera, Masaaki
Publicado no Sci Rep (2017)

KEGG for linking genomes to life and the environment

Por Kanehisa, Minoru, Araki, Michihiro, Goto, Susumu, Hattori, Masahiro, Hirakawa, Mika, Itoh, Masumi, Katayama, Toshiaki, Kawashima, Shuichi, Okuda, Shujiro, Tokimatsu, Toshiaki, Yamanishi, Yoshihiro
Publicado em 2008

Multiomics in Grape Berry Skin Revealed Specific Induction of the Stilbene Synthetic Pathway by Ultraviolet-C Irradiation

Por Suzuki, Mami, Nakabayashi, Ryo, Ogata, Yoshiyuki, Sakurai, Nozomu, Tokimatsu, Toshiaki, Goto, Susumu, Suzuki, Makoto, Jasinski, Michal, Martinoia, Enrico, Otagaki, Shungo, Matsumoto, Shogo, Saito, Kazuki, Shiratake, Katsuhiro
Publicado no Plant Physiol (2015)

KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters

Por Nakaya, Akihiro, Katayama, Toshiaki, Itoh, Masumi, Hiranuka, Kazushi, Kawashima, Shuichi, Moriya, Yuki, Okuda, Shujiro, Tanaka, Michihiro, Tokimatsu, Toshiaki, Yamanishi, Yoshihiro, Yoshizawa, Akiyasu C., Kanehisa, Minoru, Goto, Susumu
Publicado em 2013

KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data

Por Sakurai, Nozomu, Ara, Takeshi, Ogata, Yoshiyuki, Sano, Ryosuke, Ohno, Takashi, Sugiyama, Kenjiro, Hiruta, Atsushi, Yamazaki, Kiyoshi, Yano, Kentaro, Aoki, Koh, Aharoni, Asaph, Hamada, Kazuki, Yokoyama, Koji, Kawamura, Shingo, Otsuka, Hirofumi, Tokimatsu, Toshiaki, Kanehisa, Minoru, Suzuki, Hideyuki, Saito, Kazuki, Shibata, Daisuke
Publicado em 2011