Visualization of consensus genome structure without using a reference genome

Por Tada, Ipputa, Tanizawa, Yasuhiro, Arita, Masanori
Publicado no BMC Genomics (2017)

DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication

Por Tanizawa, Yasuhiro, Fujisawa, Takatomo, Nakamura, Yasukazu
Publicado no Bioinformatics (2018)

Complete genome sequence and analysis of Lactobacillus hokkaidonensis LOOC260(T), a psychrotrophic lactic acid bacterium isolated from silage

Por Tanizawa, Yasuhiro, Tohno, Masanori, Kaminuma, Eli, Nakamura, Yasukazu, Arita, Masanori
Publicado no BMC Genomics (2015)

DFAST and DAGA: web-based integrated genome annotation tools and resources

Por TANIZAWA, Yasuhiro, FUJISAWA, Takatomo, KAMINUMA, Eli, NAKAMURA, Yasukazu, ARITA, Masanori
Publicado no Biosci Microbiota Food Health (2016)

Revealing the genomic differences between two subgroups in Lactobacillus gasseri

Por TADA, Ipputa, TANIZAWA, Yasuhiro, ENDO, Akihito, TOHNO, Masanori, ARITA, Masanori
Publicado no Biosci Microbiota Food Health (2017)

Draft Genome Sequence of Lactobacillus oryzae Strain SG293(T)

Por Tanizawa, Yasuhiro, Fujisawa, Takatomo, Mochizuki, Takako, Kaminuma, Eli, Nakamura, Yasukazu, Tohno, Masanori
Publicado em 2014

Unique niche-specific adaptation of fructophilic lactic acid bacteria and proposal of three Apilactobacillus species as novel members of the group

Por Maeno, Shintaro, Nishimura, Hiroya, Tanizawa, Yasuhiro, Dicks, Leon, Arita, Masanori, Endo, Akihito
Publicado no BMC Microbiol (2021)

H2DB: a heritability database across multiple species by annotating trait-associated genomic loci

Por Kaminuma, Eli, Fujisawa, Takatomo, Tanizawa, Yasuhiro, Sakamoto, Naoko, Kurata, Nori, Shimizu, Tokurou, Nakamura, Yasukazu
Publicado em 2013

Draft Genome Sequence of Weissella oryzae SG25(T), Isolated from Fermented Rice Grains

Por Tanizawa, Yasuhiro, Fujisawa, Takatomo, Mochizuki, Takako, Kaminuma, Eli, Suzuki, Yutaka, Nakamura, Yasukazu, Tohno, Masanori
Publicado em 2014

Fructophilic Lactic Acid Bacteria, a Unique Group of Fructose-Fermenting Microbes

Por Endo, Akihito, Maeno, Shintaro, Tanizawa, Yasuhiro, Kneifel, Wolfgang, Arita, Masanori, Dicks, Leon, Salminen, Seppo
Publicado no Appl Environ Microbiol (2018)

Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri

Por TANIZAWA, Yasuhiro, KOBAYASHI, Hisami, KAMINUMA, Eli, SAKAMOTO, Mitsuo, OHKUMA, Moriya, NAKAMURA, Yasukazu, ARITA, Masanori, TOHNO, Masanori
Publicado no Biosci Microbiota Food Health (2017)

Pseudofructophilic Leuconostoc citreum Strain F192-5, Isolated from Satsuma Mandarin Peel

Por Maeno, Shintaro, Tanizawa, Yasuhiro, Kajikawa, Akinobu, Kanesaki, Yu, Kubota, Eri, Arita, Masanori, Dicks, Leon, Endo, Akihito
Publicado no Appl Environ Microbiol (2019)

Whole-exome sequencing of 79 xenografts as a potential approach for the identification of genetic variants associated with sensitivity to cytotoxic anticancer drugs

Por Udagawa, Chihiro, Sasaki, Yasushi, Tanizawa, Yasuhiro, Suemizu, Hiroshi, Ohnishi, Yasuyuki, Nakamura, Yasukazu, Tokino, Takashi, Zembutsu, Hitoshi
Publicado no PLoS One (2020)

Draft Sequencing of the Heterozygous Diploid Genome of Satsuma (Citrus unshiu Marc.) Using a Hybrid Assembly Approach

Por Shimizu, Tokurou, Tanizawa, Yasuhiro, Mochizuki, Takako, Nagasaki, Hideki, Yoshioka, Terutaka, Toyoda, Atsushi, Fujiyama, Asao, Kaminuma, Eli, Nakamura, Yasukazu
Publicado no Front Genet (2017)

Comparative genomics of Fructobacillus spp. and Leuconostoc spp. reveals niche-specific evolution of Fructobacillus spp.

Por Endo, Akihito, Tanizawa, Yasuhiro, Tanaka, Naoto, Maeno, Shintaro, Kumar, Himanshu, Shiwa, Yuh, Okada, Sanae, Yoshikawa, Hirofumi, Dicks, Leon, Nakagawa, Junichi, Arita, Masanori
Publicado no BMC Genomics (2015)

DNApod: DNA polymorphism annotation database from next-generation sequence read archives

Por Mochizuki, Takako, Tanizawa, Yasuhiro, Fujisawa, Takatomo, Ohta, Tazro, Nikoh, Naruo, Shimizu, Tokurou, Toyoda, Atsushi, Fujiyama, Asao, Kurata, Nori, Nagasaki, Hideki, Kaminuma, Eli, Nakamura, Yasukazu
Publicado no PLoS One (2017)

OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species

Por Kajiya-Kanegae, Hiromi, Ohyanagi, Hajime, Ebata, Toshinobu, Tanizawa, Yasuhiro, Onogi, Akio, Sawada, Yuji, Hirai, Masami Yokota, Wang, Zi-Xuan, Han, Bin, Toyoda, Atsushi, Fujiyama, Asao, Iwata, Hiroyoshi, Tsuda, Katsutoshi, Suzuki, Toshiya, Nosaka-Takahashi, Misuzu, Nonomura, Ken-ichi, Nakamura, Yasukazu, Kawamoto, Shoko, Kurata, Nori, Sato, Yutaka
Publicado no Rice (N Y) (2021)

Large-scale genome analysis of bovine commensal Escherichia coli reveals that bovine-adapted E. coli lineages are serving as evolutionary sources of the emergence of human intestin...

Por Arimizu, Yoko, Kirino, Yumi, Sato, Mitsuhiko P., Uno, Koichi, Sato, Toshio, Gotoh, Yasuhiro, Auvray, Frédéric, Brugere, Hubert, Oswald, Eric, Mainil, Jacques G., Anklam, Kelly S., Döpfer, Dörte, Yoshino, Shuji, Ooka, Tadasuke, Tanizawa, Yasuhiro, Nakamura, Yasukazu, Iguchi, Atsushi, Morita-Ishihara, Tomoko, Ohnishi, Makoto, Akashi, Koichi, Hayashi, Tetsuya, Ogura, Yoshitoshi
Publicado no Genome Res (2019)

Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin

Por Montgomery, Sean A., Tanizawa, Yasuhiro, Galik, Bence, Wang, Nan, Ito, Tasuku, Mochizuki, Takako, Akimcheva, Svetlana, Bowman, John L., Cognat, Valérie, Maréchal-Drouard, Laurence, Ekker, Heinz, Hong, Syuan-Fei, Kohchi, Takayuki, Lin, Shih-Shun, Daisy Liu, Li-Yu, Nakamura, Yasukazu, Valeeva, Lia R., Shakirov, Eugene V., Shippen, Dorothy E., Wei, Wei-Lun, Yagura, Masaru, Yamaoka, Shohei, Yamato, Katsuyuki T., Liu, Chang, Berger, Frédéric
Publicado no Curr Biol (2020)