Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements

av Sze Sing-Hoi, Yang Qingwu
Publicerad 2008-07-01

Large-scale analysis of gene clustering in bacteria

av Yang, Qingwu, Sze, Sing-Hoi
Publicerad 2008

Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements

av Yang, Qingwu, Sze, Sing-Hoi
Publicerad 2008

Improving accuracy of multiple sequence alignment algorithms based on alignment of neighboring residues

av Lu, Yue, Sze, Sing-Hoi
Publicerad 2009

A memory-efficient algorithm to obtain splicing graphs and de novo expression estimates from de Bruijn graphs of RNA-Seq data

av Sze, Sing-Hoi, Tarone, Aaron M
Publicerad 2014

Querying Pathways in Protein Interaction Networks Based on Hidden Markov Models

av Qian, Xiaoning, Sze, Sing-Hoi, Yoon, Byung-Jun
Publicerad 2009

Supervised Protein Family Classification and New Family Construction

av Yi, Gangman, Thon, Michael R., Sze, Sing-Hoi
Publicerad 2012

Identifying Complexes from Protein Interaction Networks According to Different Types of Neighborhood Density

av Fan, Jia-Hao, Chen, Jianer, Sze, Sing-Hoi
Publicerad 2012

Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data

av Fu, Shuhua, Tarone, Aaron M, Sze, Sing-Hoi
I publikationen BMC Genomics (2015)

A divide-and-conquer algorithm for large-scale de novo transcriptome assembly through combining small assemblies from existing algorithms

av Sze, Sing-Hoi, Parrott, Jonathan J., Tarone, Aaron M.
I publikationen BMC Genomics (2017)

Identification of the syr-syp Box in the Promoter Regions of Genes Dedicated to Syringomycin and Syringopeptin Production by Pseudomonas syringae pv. syringae B301D

av Wang, Nian, Lu, Shi-En, Yang, Qingwu, Sze, Sing-Hoi, Gross, Dennis C.
Publicerad 2006

Bayesian gamma-negative binomial modeling of single-cell RNA sequencing data

av Dadaneh, Siamak Zamani, de Figueiredo, Paul, Sze, Sing-Hoi, Zhou, Mingyuan, Qian, Xiaoning
I publikationen BMC Genomics (2020)

Genomic organization, annotation, and ligand-receptor inferences of chicken chemokines and chemokine receptor genes based on comparative genomics

av Wang, Jixin, Adelson, David L, Yilmaz, Ahmet, Sze, Sing-Hoi, Jin, Yuan, Zhu, James J
Publicerad 2005

A scalable and memory-efficient algorithm for de novo transcriptome assembly of non-model organisms

av Sze, Sing-Hoi, Pimsler, Meaghan L., Tomberlin, Jeffery K., Jones, Corbin D., Tarone, Aaron M.
I publikationen BMC Genomics (2017)

A 24-48 h fed Amblyomma americanum tick saliva immuno-proteome

av Radulović, Željko M, Kim, Tae K, Porter, Lindsay M, Sze, Sing-Hoi, Lewis, Lauren, Mulenga, Albert
Publicerad 2014

Gene expression correlates of facultative predation in the blow fly Chrysomya rufifacies (Diptera: Calliphoridae)

av Pimsler, Meaghan L., Sze, Sing‐Hoi, Saenz, Sunday, Fu, Shuhua, Tomberlin, Jeffery K., Tarone, Aaron M.
I publikationen Ecol Evol (2019)

Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus

av Fu, Shuhua, Chang, Peter L., Friesen, Maren L., Teakle, Natasha L., Tarone, Aaron M., Sze, Sing-Hoi
I publikationen BMC Genomics (2019)

Arabidopsis Argonaute 10 specifically sequesters miR166/165 to regulate shoot apical meristem development

av Zhu, Hongliang, Hu, Fuqu, Wang, Ronghui, Zhou, Xin, Sze, Sing-Hoi, Liou, Lisa Wen, Barefoot, Ashley, Dickman, Martin, Zhang, Xiuren
Publicerad 2011

Accurate Prediction of a Quantitative Trait Using the Genes Controlling the Trait for Gene-Based Breeding in Cotton

av Liu, Yun-Hua, Xu, Yang, Zhang, Meiping, Cui, Yanru, Sze, Sing-Hoi, Smith, C. Wayne, Xu, Shizhong, Zhang, Hong-Bin
I publikationen Front Plant Sci (2020)

Machine learning performance in a microbial molecular autopsy context: A cross-sectional postmortem human population study

av Zhang, Yu, Pechal, Jennifer L., Schmidt, Carl J., Jordan, Heather R., Wang, Wesley W., Benbow, M. Eric, Sze, Sing-Hoi, Tarone, Aaron M.
I publikationen PLoS One (2019)