Combining Affymetrix microarray results

od Stevens, John R, Doerge, RW
Wydane 2005

Assessing Numerical Dependence in Gene Expression Summaries with the Jackknife Expression Difference

od Stevens, John R., Nicholas, Gabriel
Wydane 2012

Meta-Analysis Combines Affymetrix Microarray Results Across Laboratories

od Stevens, John R., Doerge, R. W.
Wydane 2005

A shortcut for multiple testing on the directed acyclic graph of gene ontology

od Saunders, Garrett, Stevens, John R, Isom, S Clay
Wydane w BMC Bioinformatics (2014)

A Graphical Weighted Power Improving Multiplicity Correction Approach for SNP Selections

od Saunders, Garrett, Fu, Guifang, Stevens, John R
Wydane w Curr Genomics (2014)

A Bivariate Hypothesis Testing Approach for Mapping the Trait-Influential Gene

od Saunders, Garrett, Fu, Guifang, Stevens, John R.
Wydane w Sci Rep (2017)

A comparison of multiple testing adjustment methods with block-correlation positively-dependent tests

od Stevens, John R., Al Masud, Abdullah, Suyundikov, Anvar
Wydane w PLoS One (2017)

Accounting for Missing Data in Clinical Research

od Stevens, John R., Suyundikov, Anvar, Slattery, Martha L.
Wydane w JAMA (2016)

The implementation of random survival forests in conflict management data: An examination of power sharing and third party mediation in post-conflict countries

od Whetten, Andrew B., Stevens, John R., Cann, Damon
Wydane w PLoS One (2021)

Identifying factors associated with the direction and significance of microRNA tumor-normal expression differences in colorectal cancer

od Stevens, John R., Herrick, Jennifer S., Wolff, Roger K., Slattery, Martha L.
Wydane w BMC Cancer (2017)

Power in pairs: assessing the statistical value of paired samples in tests for differential expression

od Stevens, John R., Herrick, Jennifer S., Wolff, Roger K., Slattery, Martha L.
Wydane w BMC Genomics (2018)

A comparison of probe-level and probeset models for small-sample gene expression data

od Stevens, John R, Bell, Jason L, Aston, Kenneth I, White, Kenneth L
Wydane 2010

Preadaptation to Cold Stress in Salmonella enterica Serovar Typhimurium Increases Survival during Subsequent Acid Stress Exposure

od Shah, Jigna, Desai, Prerak T., Chen, Dong, Stevens, John R., Weimer, Bart C.
Wydane 2013

SigTree: A Microbial Community Analysis Tool to Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree

od Stevens, John R., Jones, Todd R., Lefevre, Michael, Ganesan, Balasubramanian, Weimer, Bart C.
Wydane w Comput Struct Biotechnol J (2017)

Association of Cigarette Smoking and microRNA Expression in Rectal Cancer: Insight into Tumor Phenotype

od Mullany, Lila E., Herrick, Jennifer S., Wolff, Roger K., Stevens, John R., Slattery, Martha L.
Wydane w Cancer Epidemiol (2016)

Diet and lifestyle factors associated with miRNA expression in colorectal tissue

od Slattery, Martha L, Herrick, Jennifer S, Mullany, Lila E, Stevens, John R, Wolff, Roger K
Wydane w Pharmgenomics Pers Med (2016)

Alterations in microRNA expression associated with alcohol consumption in rectal cancer subjects

od Mullany, Lila E., Herrick, Jennifer S., Wolff, Roger K., Stevens, John R., Slattery, Martha L.
Wydane w Cancer Causes Control (2017)

An Assessment of Database-Validated microRNA Target Genes in Normal Colonic Mucosa: Implications for Pathway Analysis

od Slattery, Martha L, Herrick, Jennifer S, Stevens, John R, Wolff, Roger K, Mullany, Lila E
Wydane w Cancer Inform (2017)

Accounting for Dependence Induced by Weighted KNN Imputation in Paired Samples, Motivated by a Colorectal Cancer Study

od Suyundikov, Anvar, Stevens, John R., Corcoran, Christopher, Herrick, Jennifer, Wolff, Roger K., Slattery, Martha L.
Wydane w PLoS One (2015)

Incorporation of subject-level covariates in quantile normalization of miRNA data

od Suyundikov, Anvar, Stevens, John R., Corcoran, Christopher, Herrick, Jennifer, Wolff, Roger K., Slattery, Martha L.
Wydane w BMC Genomics (2015)