The genome of the truffle-parasite Tolypocladium ophioglossoides and the evolution of antifungal peptaibiotics

av Quandt, C. Alisha, Bushley, Kathryn E., Spatafora, Joseph W.
I publikationen BMC Genomics (2015)

Hal: an Automated Pipeline for Phylogenetic Analyses of Genomic Data

av Robbertse, Barbara, Yoder, Ryan J., Boyd, Alex, Reeves, John, Spatafora, Joseph W.
Publicerad 2011

A dilution effect in the emerging amphibian pathogen Batrachochytrium dendrobatidis

av Searle, Catherine L., Biga, Lindsay M., Spatafora, Joseph W., Blaustein, Andrew R.
Publicerad 2011

Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides

av Quandt, C. Alisha, Di, Yanming, Elser, Justin, Jaiswal, Pankaj, Spatafora, Joseph W.
I publikationen G3 (Bethesda) (2016)

Cyclosporine Biosynthesis in Tolypocladium inflatum Benefits Fungal Adaptation to the Environment

av Yang, Xiuqing, Feng, Peng, Yin, Ying, Bushley, Kathryn, Spatafora, Joseph W., Wang, Chengshu
I publikationen mBio (2018)

Detection and Identification of Fungi Intimately Associated with the Brown Seaweed Fucus serratus

av Zuccaro, Alga, Schoch, Conrad L., Spatafora, Joseph W., Kohlmeyer, Jan, Draeger, Siegfried, Mitchell, Julian I.
Publicerad 2008

Phylogenetic taxon definitions for Fungi, Dikarya, Ascomycota and Basidiomycota

av Hibbett, David S., Blackwell, Meredith, James, Timothy Y., Spatafora, Joseph W., Taylor, John W., Vilgalys, Rytas
I publikationen IMA Fungus (2018)

Phylogenetic classification of Cordyceps and the clavicipitaceous fungi

av Sung, Gi-Ho, Hywel-Jones, Nigel L., Sung, Jae-Mo, Luangsa-ard, J. Jennifer, Shrestha, Bhushan, Spatafora, Joseph W.
Publicerad 2007

Primer -- The Fungi

av Stajich, Jason E., Berbee, Mary L., Blackwell, Meredith, Hibbett, David S., James, Timothy Y., Spatafora, Joseph W., Taylor, John W.
Publicerad 2009

The Architecture of Metabolism Maximizes Biosynthetic Diversity in the Largest Class of Fungi

av Gluck-Thaler, Emile, Haridas, Sajeet, Binder, Manfred, Grigoriev, Igor V, Crous, Pedro W, Spatafora, Joseph W, Bushley, Kathryn, Slot, Jason C
I publikationen Mol Biol Evol (2020)

New 1F1N Species Combinations in Ophiocordycipitaceae (Hypocreales)

av Spatafora, Joseph W., Quandt, C. Alisha, Kepler, Ryan M., Sung, Gi-Ho, Shrestha, Bhushan, Hywel-Jones, Nigel L., Luangsa-ard, J. Jennifer
I publikationen IMA Fungus (2015)

Draft Genome Sequence of Microdochium bolleyi, a Dark Septate Fungal Endophyte of Beach Grass

av David, Aaron S., Haridas, Sajeet, LaButti, Kurt, Lim, Joanne, Lipzen, Anna, Wang, Mei, Barry, Kerrie, Grigoriev, Igor V., Spatafora, Joseph W., May, Georgiana
I publikationen Genome Announc (2016)

Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locu...

av Mujic, Alija Bajro, Kuo, Alan, Tritt, Andrew, Lipzen, Anna, Chen, Cindy, Johnson, Jenifer, Sharma, Aditi, Barry, Kerrie, Grigoriev, Igor V., Spatafora, Joseph W.
I publikationen G3 (Bethesda) (2017)

Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi

av Chang, Ying, Rochon, D’Ann, Sekimoto, Satoshi, Wang, Yan, Chovatia, Mansi, Sandor, Laura, Salamov, Asaf, Grigoriev, Igor V., Stajich, Jason E., Spatafora, Joseph W.
I publikationen Sci Rep (2021)

Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade

av Thrash, J. Cameron, Boyd, Alex, Huggett, Megan J., Grote, Jana, Carini, Paul, Yoder, Ryan J., Robbertse, Barbara, Spatafora, Joseph W., Rappé, Michael S., Giovannoni, Stephen J.
Publicerad 2011

Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951

av Toome, Merje, Kuo, Alan, Henrissat, Bernard, Lipzen, Anna, Tritt, Andrew, Yoshinaga, Yuko, Zane, Matthew, Barry, Kerrie, Grigoriev, Igor V., Spatafora, Joseph W., Aime, M. Catherine
Publicerad 2014

Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolu...

av Tabima, Javier F., Trautman, Ian A., Chang, Ying, Wang, Yan, Mondo, Stephen, Kuo, Alan, Salamov, Asaf, Grigoriev, Igor V., Stajich, Jason E., Spatafora, Joseph W.
I publikationen G3 (Bethesda) (2020)

Chromosome rearrangements shape the diversification of secondary metabolism in the cyclosporin producing fungus Tolypocladium inflatum

av Olarte, Rodrigo A., Menke, Jon, Zhang, Ying, Sullivan, Shawn, Slot, Jason C., Huang, Yinyin, Badalamenti, Jonathan P., Quandt, Alisha C., Spatafora, Joseph W., Bushley, Kathryn E.
I publikationen BMC Genomics (2019)

Conserved Subgroups and Developmental Regulation in the Monocot rop Gene Family

av Christensen, Todd M., Vejlupkova, Zuzana, Sharma, Yogesh K., Arthur, Kirstin M., Spatafora, Joseph W., Albright, Carol A., Meeley, Robert B., Duvick, Jon P., Quatrano, Ralph S., Fowler, John E.
Publicerad 2003

Genome-scale phylogenetics reveals a monophyletic Zoopagales (Zoopagomycota, Fungi)

av Davis, William J., Amses, Kevin R., Benny, Gerald L., Carter-House, Derreck, Chang, Ying, Grigoriev, Igor, Smith, Matthew E., Spatafora, Joseph W., Stajich, Jason E., James, Timothy Y.
I publikationen Mol Phylogenet Evol (2019)