A growing pandemic: A review of Nosema parasites in globally distributed domesticated and native bees

Tekijä Grupe, Arthur C., Quandt, C. Alisha
Julkaisussa PLoS Pathog (2020)

The genome of the truffle-parasite Tolypocladium ophioglossoides and the evolution of antifungal peptaibiotics

Tekijä Quandt, C. Alisha, Bushley, Kathryn E., Spatafora, Joseph W.
Julkaisussa BMC Genomics (2015)

Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides

Tekijä Quandt, C. Alisha, Di, Yanming, Elser, Justin, Jaiswal, Pankaj, Spatafora, Joseph W.
Julkaisussa G3 (Bethesda) (2016)

The genome of an intranuclear parasite, Paramicrosporidium saccamoebae, reveals alternative adaptations to obligate intracellular parasitism

Tekijä Quandt, C Alisha, Beaudet, Denis, Corsaro, Daniele, Walochnik, Julia, Michel, Rolf, Corradi, Nicolas, James, Timothy Y
Julkaisussa eLife (2017)

New 1F1N Species Combinations in Ophiocordycipitaceae (Hypocreales)

Tekijä Spatafora, Joseph W., Quandt, C. Alisha, Kepler, Ryan M., Sung, Gi-Ho, Shrestha, Bhushan, Hywel-Jones, Nigel L., Luangsa-ard, J. Jennifer
Julkaisussa IMA Fungus (2015)

Leveraging single-cell genomics to expand the fungal tree of life

Tekijä Ahrendt, Steven R., Quandt, C. Alisha, Ciobanu, Doina, Clum, Alicia, Salamov, Asaf, Andreopoulos, Bill, Cheng, Jan-Fang, Woyke, Tanja, Pelin, Adrian, Henrissat, Bernard, Reynolds, Nicole K., Benny, Gerald L., Smith, Matthew E., James, Timothy Y., Grigoriev, Igor V.
Julkaisussa Nat Microbiol (2018)

A phylogenetically-based nomenclature for Cordycipitaceae (Hypocreales)

Tekijä Kepler, Ryan M., Luangsa-ard, J. Jennifer, Hywel-Jones, Nigel L., Quandt, C. Alisha, Sung, Gi-Ho, Rehner, Stephen A., Aime, M. Catherine, Henkel, Terry W., Sanjuan, Tatiana, Zare, Rasoul, Chen, Mingjun, Li, Zhengzhi, Rossman, Amy Y., Spatafora, Joseph W., Shrestha, Bhushan
Julkaisussa IMA Fungus (2017)

Fungi in the Marine Environment: Open Questions and Unsolved Problems

Tekijä Amend, Anthony, Burgaud, Gaetan, Cunliffe, Michael, Edgcomb, Virginia P., Ettinger, Cassandra L., Gutiérrez, M. H., Heitman, Joseph, Hom, Erik F. Y., Ianiri, Giuseppe, Jones, Adam C., Kagami, Maiko, Picard, Kathryn T., Quandt, C. Alisha, Raghukumar, Seshagiri, Riquelme, Mertixell, Stajich, Jason, Vargas-Muñiz, José, Walker, Allison K., Yarden, Oded, Gladfelter, Amy S.
Julkaisussa mBio (2019)

Phylogenetic-based nomenclatural proposals for Ophiocordycipitaceae (Hypocreales) with new combinations in Tolypocladium

Tekijä Quandt, C. Alisha, Kepler, Ryan M., Gams, Walter, Araújo, João P. M., Ban, Sayaka, Evans, Harry C., Hughes, David, Humber, Richard, Hywel-Jones, Nigel, Li, Zengzhi, Luangsa-ard, J. Jennifer, Rehner, Stephen A., Sanjuan, Tatiana, Sato, Hiroki, Shrestha, Bhushan, Sung, Gi-Ho, Yao, Yi-Jian, Zare, Rasoul, Spatafora, Joseph W.
Julkaistu 2014

A single-cell genomics pipeline for environmental microbial eukaryotes

Tekijä Ciobanu, Doina, Clum, Alicia, Ahrendt, Steven, Andreopoulos, William B., Salamov, Asaf, Chan, Sandy, Quandt, C. Alisha, Foster, Brian, Meier-Kolthoff, Jan P., Tang, Yung Tsu, Schwientek, Patrick, Benny, Gerald L., Smith, Matthew E., Bauer, Diane, Deshpande, Shweta, Barry, Kerrie, Copeland, Alex, Singer, Steven W., Woyke, Tanja, Grigoriev, Igor V., James, Timothy Y., Cheng, Jan-Fang
Julkaisussa iScience (2021)

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

Tekijä Peter, Martina, Kohler, Annegret, Ohm, Robin A., Kuo, Alan, Krützmann, Jennifer, Morin, Emmanuelle, Arend, Matthias, Barry, Kerrie W., Binder, Manfred, Choi, Cindy, Clum, Alicia, Copeland, Alex, Grisel, Nadine, Haridas, Sajeet, Kipfer, Tabea, LaButti, Kurt, Lindquist, Erika, Lipzen, Anna, Maire, Renaud, Meier, Barbara, Mihaltcheva, Sirma, Molinier, Virginie, Murat, Claude, Pöggeler, Stefanie, Quandt, C. Alisha, Sperisen, Christoph, Tritt, Andrew, Tisserant, Emilie, Crous, Pedro W., Henrissat, Bernard, Nehls, Uwe, Egli, Simon, Spatafora, Joseph W., Grigoriev, Igor V., Martin, Francis M.
Julkaisussa Nat Commun (2016)