OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs

Por Kriventseva, Evgenia V, Kuznetsov, Dmitry, Tegenfeldt, Fredrik, Manni, Mosè, Dias, Renata, Simão, Felipe A, Zdobnov, Evgeny M
Publicado no Nucleic Acids Res (2019)

BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics

Por Waterhouse, Robert M, Seppey, Mathieu, Simão, Felipe A, Manni, Mosè, Ioannidis, Panagiotis, Klioutchnikov, Guennadi, Kriventseva, Evgenia V, Zdobnov, Evgeny M
Publicado no Mol Biol Evol (2018)

OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software

Por Kriventseva, Evgenia V., Tegenfeldt, Fredrik, Petty, Tom J., Waterhouse, Robert M., Simão, Felipe A., Pozdnyakov, Igor A., Ioannidis, Panagiotis, Zdobnov, Evgeny M.
Publicado no Nucleic Acids Res (2014)

OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs

Por Zdobnov, Evgeny M., Tegenfeldt, Fredrik, Kuznetsov, Dmitry, Waterhouse, Robert M., Simão, Felipe A., Ioannidis, Panagiotis, Seppey, Mathieu, Loetscher, Alexis, Kriventseva, Evgenia V.
Publicado no Nucleic Acids Res (2017)

Genomic Features of the Damselfly Calopteryx splendens Representing a Sister Clade to Most Insect Orders

Por Ioannidis, Panagiotis, Simao, Felipe A., Waterhouse, Robert M., Manni, Mosè, Seppey, Mathieu, Robertson, Hugh M., Misof, Bernhard, Niehuis, Oliver, Zdobnov, Evgeny M.
Publicado no Genome Biol Evol (2017)

Genome Sequencing of the Phytoseiid Predatory Mite Metaseiulus occidentalis Reveals Completely Atomized Hox Genes and Superdynamic Intron Evolution

Por Hoy, Marjorie A., Waterhouse, Robert M., Wu, Ke, Estep, Alden S., Ioannidis, Panagiotis, Palmer, William J., Pomerantz, Aaron F., Simão, Felipe A., Thomas, Jainy, Jiggins, Francis M., Murphy, Terence D., Pritham, Ellen J., Robertson, Hugh M., Zdobnov, Evgeny M., Gibbs, Richard A., Richards, Stephen
Publicado no Genome Biol Evol (2016)

“Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes”

Por Neafsey, Daniel E., Waterhouse, Robert M., Abai, Mohammad R., Aganezov, Sergey S., Alekseyev, Max A., Allen, James E., Amon, James, Arcà, Bruno, Arensburger, Peter, Artemov, Gleb, Assour, Lauren A., Basseri, Hamidreza, Berlin, Aaron, Birren, Bruce W., Blandin, Stephanie A., Brockman, Andrew I., Burkot, Thomas R., Burt, Austin, Chan, Clara S., Chauve, Cedric, Chiu, Joanna C., Christensen, Mikkel, Costantini, Carlo, Davidson, Victoria L.M., Deligianni, Elena, Dottorini, Tania, Dritsou, Vicky, Gabriel, Stacey B., Guelbeogo, Wamdaogo M., Hall, Andrew B., Han, Mira V., Hlaing, Thaung, Hughes, Daniel S.T., Jenkins, Adam M., Jiang, Xiaofang, Jungreis, Irwin, Kakani, Evdoxia G., Kamali, Maryam, Kemppainen, Petri, Kennedy, Ryan C., Kirmitzoglou, Ioannis K., Koekemoer, Lizette L., Laban, Njoroge, Langridge, Nicholas, Lawniczak, Mara K.N., Lirakis, Manolis, Lobo, Neil F., Lowy, Ernesto, MacCallum, Robert M., Mao, Chunhong, Maslen, Gareth, Mbogo, Charles, McCarthy, Jenny, Michel, Kristin, Mitchell, Sara N., Moore, Wendy, Murphy, Katherine A., Naumenko, Anastasia N., Nolan, Tony, Novoa, Eva M., O'Loughlin, Samantha, Oringanje, Chioma, Oshaghi, Mohammad A., Pakpour, Nazzy, Papathanos, Philippos A., Peery, Ashley N., Povelones, Michael, Prakash, Anil, Price, David P., Rajaraman, Ashok, Reimer, Lisa J., Rinker, David C., Rokas, Antonis, Russell, Tanya L., Sagnon, N'Fale, Sharakhova, Maria V., Shea, Terrance, Simão, Felipe A., Simard, Frederic, Slotman, Michel A., Somboon, Pradya, Stegniy, Vladimir, Struchiner, Claudio J., Thomas, Gregg W.C., Tojo, Marta, Topalis, Pantelis, Tubio, José M.C., Unger, Maria F., Vontas, John, Walton, Catherine, Wilding, Craig S., Willis, Judith H., Wu, Yi-Chieh, Yan, Guiyun, Zdobnov, Evgeny M., Zhou, Xiaofan, Catteruccia, Flaminia, Christophides, George K., Collins, Frank H., Cornman, Robert S., Crisanti, Andrea, Donnelly, Martin J., Emrich, Scott J., Fontaine, Michael C., Gelbart, William, Hahn, Matthew W., Hansen, Immo A., Howell, Paul I., Kafatos, Fotis C., Kellis, Manolis, Lawson, Daniel, Louis, Christos, Luckhart, Shirley, Muskavitch, Marc A.T., Ribeiro, José M., Riehle, Michael A., Sharakhov, Igor V., Tu, Zhijian, Zwiebel, Laurence J., Besansky, Nora J.
Publicado no Science (2014)