Challenges and Promise for the Development of Human Immune Monitoring

Por Shen-Orr, Shai S.
Publicado em 2012

Variability in the Immune System: of Vaccine Responses and Immune States

Por Shen-Orr, Shai S., Furman, David
Publicado em 2013

Computational Deconvolution: Extracting Cell Type-Specific Information from Heterogeneous Samples

Por Shen-Orr, Shai S., Gaujoux, Renaud
Publicado em 2013

Reconstructing the Genomic Content of Microbiome Taxa through Shotgun Metagenomic Deconvolution

Por Carr, Rogan, Shen-Orr, Shai S., Borenstein, Elhanan
Publicado em 2013

Composition and regulation of maternal and zygotic transcriptomes reflects species-specific reproductive mode

Por Shen-Orr, Shai S, Pilpel, Yitzhak, Hunter, Craig P
Publicado em 2010

Significance analysis of xMap cytokine bead arrays

Por Won, Joong-Ho, Goldberger, Ofir, Shen-Orr, Shai S., Davis, Mark M., Olshen, Richard A.
Publicado em 2012

New tools for classification and monitoring of autoimmune diseases

Por Maecker, Holden T., Lindstrom, Tamsin M., Robinson, William H., Utz, Paul J., Hale, Matthew, Boyd, Scott D., Shen-Orr, Shai S., Fathman, C. Garrison
Publicado em 2012

Pairing of competitive and topologically distinct regulatory modules enhances patterned gene expression

Por Yanai, Itai, Baugh, L Ryan, Smith, Jessica J, Roehrig, Casey, Shen-Orr, Shai S, Claggett, Julia M, Hill, Andrew A, Slonim, Donna K, Hunter, Craig P
Publicado em 2008

TOWARDS A CYTOKINE-CELL INTERACTION KNOWLEDGEBASE OF THE ADAPTIVE IMMUNE SYSTEM

Por SHEN-ORR, SHAI S., GOLDBERGER, OFIR, GARTEN, YAEL, ROSENBERG-HASSON, YAEL, LOVELACE, PATRICIA A., HIRSCHBERG, DAVID L., ALTMAN, RUSS B., DAVIS, MARK M., BUTTE, ATUL J.
Publicado em 2009

cell type–specific gene expression differences in complex tissues

Por Shen-Orr, Shai S, Tibshirani, Robert, Khatri, Purvesh, Bodian, Dale L, Staedtler, Frank, Perry, Nicholas M, Hastie, Trevor, Sarwal, Minnie M, Davis, Mark M, Butte, Atul J
Publicado em 2010

Variation in the human immune system is largely driven by non-heritable influences

Por Brodin, Petter, Jojic, Vladimir, Gao, Tianxiang, Bhattacharya, Sanchita, Angel, Cesar J Lopez, Furman, David, Shen-Orr, Shai, Dekker, Cornelia L, Swan, Gary E., Butte, Atul J, Maecker, Holden T, Davis, Mark M
Publicado no Cell (2015)

Cytomegalovirus infection improves immune responses to influenza

Por Furman, David, Jojic, Vladimir, Sharma, Shalini, Shen-Orr, Shai, Angel, Cesar J Lopez, Onengut-Gumuscu, Suna, Kidd, Brian, Maecker, Holden T, Concannon, Patrick, Dekker, Cornelia L, Thomas, Paul G, Davis, Mark M
Publicado no Sci Transl Med (2015)

A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure

Por Baron, Maayan, Veres, Adrian, Wolock, Samuel L., Faust, Aubrey L., Gaujoux, Renaud, Vetere, Amedeo, Ryu, Jennifer Hyoje, Wagner, Bridget K., Shen-Orr, Shai S., Klein, Allon M., Melton, Douglas A., Yanai, Itai
Publicado no Cell Syst (2016)

Apoptosis and other immune biomarkers predict influenza vaccine responsiveness

Por Furman, David, Jojic, Vladimir, Kidd, Brian, Shen-Orr, Shai, Price, Jordan, Jarrell, Justin, Tse, Tiffany, Huang, Huang, Lund, Peder, Maecker, Holden T, Utz, Paul J, Dekker, Cornelia L, Koller, Daphne, Davis, Mark M
Publicado em 2013

Apoptosis and other immune biomarkers predict influenza vaccine responsiveness

Por Furman, David, Jojic, Vladimir, Kidd, Brian, Shen-Orr, Shai, Price, Jordan, Jarrell, Justin, Tse, Tiffany, Huang, Huang, Lund, Peder, Maecker, Holden T, Utz, Paul J, Dekker, Cornelia L, Koller, Daphne, Davis, Mark M
Publicado em 2013

Apoptosis and other immune biomarkers predict influenza vaccine responsiveness

Por Furman, David, Jojic, Vladimir, Kidd, Brian, Shen-Orr, Shai, Price, Jordan, Jarrell, Justin, Tse, Tiffany, Huang, Huang, Lund, Peder, Maecker, Holden T, Utz, Paul J, Dekker, Cornelia L, Koller, Daphne, Davis, Mark M
Publicado no Mol Syst Biol (2014)

Systems Immunology Reveals Markers of Susceptibility to West Nile Virus Infection

Por Qian, Feng, Goel, Gautam, Meng, Hailong, Wang, Xiaomei, You, Fuping, Devine, Lesley, Raddassi, Khadir, Garcia, Melissa N., Murray, Kristy O., Bolen, Christopher R., Gaujoux, Renaud, Shen-Orr, Shai S., Hafler, David, Fikrig, Erol, Xavier, Ramnik, Kleinstein, Steven H., Montgomery, Ruth R.
Publicado no Clin Vaccine Immunol (2014)

Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures

Por Nakaya, Helder I., Hagan, Thomas, Duraisingham, Sai S., Lee, Eva K., Kwissa, Marcin, Rouphael, Nadine, Frasca, Daniela, Gersten, Merril, Mehta, Aneesh K., Gaujoux, Renaud, Li, Gui-Mei, Gupta, Shakti, Ahmed, Rafi, Mulligan, Mark J., Shen-Orr, Shai, Blomberg, Bonnie B., Subramaniam, Shankar, Pulendran, Bali
Publicado no Immunity (2015)

Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans

Por Shen-Orr, Shai S., Furman, David, Kidd, Brian A., Hadad, Francois, Lovelace, Patricia, Huang, Ying-Wen, Rosenberg-Hasson, Yael, Mackey, Sally, Gomari Grisar, Fatemeh A., Pickman, Yishai, Maecker, Holden T., Chien, Yueh-hsiu, Dekker, Cornelia L., Wu, Joseph C., Butte, Atul J., Davis, Mark M.
Publicado no Cell Syst (2016)