Fixed single-cell transcriptomic characterization of human radial glial diversity

von Thomsen, Elliot R., Mich, John K., Yao, Zizhen, Hodge, Rebecca D., Doyle, Adele M., Jang, Sumin, Shehata, Soraya I., Nelson, Angelique M., Shapovalova, Nadiya V., Levi, Boaz P., Ramanathan, Sharad
Veröffentlicht in Nat Methods (2015)

Adult Mouse Cortical Cell Taxonomy by Single Cell Transcriptomics

von Tasic, Bosiljka, Menon, Vilas, Nguyen, Thuc Nghi, Kim, Tae Kyung, Jarsky, Tim, Yao, Zizhen, Levi, Boaz, Gray, Lucas T., Sorensen, Staci A., Dolbeare, Tim, Bertagnolli, Darren, Goldy, Jeff, Shapovalova, Nadiya, Parry, Sheana, Lee, Changkyu, Smith, Kimberly, Bernard, Amy, Madisen, Linda, Sunkin, Susan M., Hawrylycz, Michael, Koch, Christof, Zeng, Hongkui
Veröffentlicht in Nat Neurosci (2016)

Single-cell profiling of an in vitro model of human interneuron development reveals temporal dynamics of cell type production and maturation

von Close, Jennie L., Yao, Zizhen, Levi, Boaz P., Miller, Jeremy A., Bakken, Trygve E., Menon, Vilas, Ting, Jonathan T., Wall, Abigail, Krostag, Anne-Rachel, Thomsen, Elliot R., Nelson, Angel M., Mich, John K., Hodge, Rebecca D., Shehata, Soraya I., Glass, Ian A., Bort, Susan, Shapovalova, Nadiya V., Ngo, N. Kiet, Grimley, Joshua S., Phillips, John W., Thompson, Carol L., Ramanathan, Sharad, Lein, Ed
Veröffentlicht in Neuron (2017)

A single cell roadmap of lineage bifurcation in human ESC models of embryonic brain development

von Yao, Zizhen, Mich, John K., Ku, Sherman, Menon, Vilas, Krostag, Anne-Rachel, Martinez, Refugio A., Furchtgott, Leon, Mulholland, Heather, Bort, Susan, Fuqua, Margaret A., Gregor, Ben W., Hodge, Rebecca D., Jayabalu, Anu, May, Ryan C., Melton, Samuel, Nelson, Angelique M., Ngo, N. Kiet, Shapovalova, Nadiya V., Shehata, Soraya I., Smith, Michael W., Tait, Leah J., Thompson, Carol L., Thomsen, Elliot R., Ye, Chaoyang, Glass, Ian A., Kaykas, Ajamete, Yao, Shuyuan, Phillips, John W., Grimley, Joshua S., Levi, Boaz P., Wang, Yanling, Ramanathan, Sharad
Veröffentlicht in Cell Stem Cell (2016)

A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation

von Yao, Zizhen, van Velthoven, Cindy T. J., Nguyen, Thuc Nghi, Goldy, Jeff, Sedeno-Cortes, Adriana E., Baftizadeh, Fahimeh, Bertagnolli, Darren, Casper, Tamara, Chiang, Megan, Crichton, Kirsten, Ding, Song-Lin, Fong, Olivia, Garren, Emma, Glandon, Alexandra, Gouwens, Nathan W., Gray, James, Graybuck, Lucas T., Hawrylycz, Michael J., Hirschstein, Daniel, Kroll, Matthew, Lathia, Kanan, Lee, Changkyu, Levi, Boaz, McMillen, Delissa, Mok, Stephanie, Pham, Thanh, Ren, Qingzhong, Rimorin, Christine, Shapovalova, Nadiya, Sulc, Josef, Sunkin, Susan M., Tieu, Michael, Torkelson, Amy, Tung, Herman, Ward, Katelyn, Dee, Nick, Smith, Kimberly A., Tasic, Bosiljka, Zeng, Hongkui
Veröffentlicht in Cell (2021)

Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex

von Mich, John K., Graybuck, Lucas T., Hess, Erik E., Mahoney, Joseph T., Kojima, Yoshiko, Ding, Yi, Somasundaram, Saroja, Miller, Jeremy A., Kalmbach, Brian E., Radaelli, Cristina, Gore, Bryan B., Weed, Natalie, Omstead, Victoria, Bishaw, Yemeserach, Shapovalova, Nadiya V., Martinez, Refugio A., Fong, Olivia, Yao, Shenqin, Mortrud, Marty, Chong, Peter, Loftus, Luke, Bertagnolli, Darren, Goldy, Jeff, Casper, Tamara, Dee, Nick, Opitz-Araya, Ximena, Cetin, Ali, Smith, Kimberly A., Gwinn, Ryder P., Cobbs, Charles, Ko, Andrew L., Ojemann, Jeffrey G., Keene, C. Dirk, Silbergeld, Daniel L., Sunkin, Susan M., Gradinaru, Viviana, Horwitz, Gregory D., Zeng, Hongkui, Tasic, Bosiljka, Lein, Ed S., Ting, Jonathan T., Levi, Boaz P.
Veröffentlicht in Cell Rep (2021)

Shared and distinct transcriptomic cell types across neocortical areas

von Tasic, Bosiljka, Yao, Zizhen, Graybuck, Lucas T., Smith, Kimberly A., Nguyen, Thuc Nghi, Bertagnolli, Darren, Goldy, Jeff, Garren, Emma, Economo, Michael N., Viswanathan, Sarada, Penn, Osnat, Bakken, Trygve, Menon, Vilas, Miller, Jeremy, Fong, Olivia, Hirokawa, Karla E., Lathia, Kanan, Rimorin, christine, Tieu, Michael, Larsen, Rachael, casper, Tamara, Barkan, Eliza, Kroll, Matthew, Parry, Sheana, Shapovalova, Nadiya V., Hirschstein, Daniel, Pendergraft, Julie, Sullivan, Heather A., Kim, Tae Kyung, Szafer, Aaron, Dee, Nick, Groblewski, Peter, Wickersham, ian, cetin, Ali, Harris, Julie A., Levi, Boaz P., Sunkin, Susan M., Madisen, Linda, Daigle, Tanya L., Looger, Loren, Bernard, Amy, Phillips, John, Lein, Ed, Hawrylycz, Michael, Svoboda, Karel, Jones, Allan R., Koch, christof, Zeng, Hongkui
Veröffentlicht in Nature (2018)

Conserved cell types with divergent features in human versus mouse cortex

von Hodge, Rebecca D, Bakken, Trygve E, Miller, Jeremy A, Smith, Kimberly A, Barkan, Eliza R, Graybuck, Lucas T, Close, Jennie L, Long, Brian, Johansen, Nelson, Penn, Osnat, Yao, Zizhen, Eggermont, Jeroen, Hollt, Thomas, Levi, Boaz P, Shehata, Soraya I, Aevermann, Brian, Beller, Allison, Bertagnolli, Darren, Brouner, Krissy, Casper, Tamara, Cobbs, Charles, Dalley, Rachel, Dee, Nick, Ding, Song-Lin, Ellenbogen, Richard G, Fong, Olivia, Garren, Emma, Goldy, Jeff, Gwinn, Ryder P, Hirschstein, Daniel, Keene, C Dirk, Keshk, Mohamed, Ko, Andrew L, Lathia, Kanan, Mahfouz, Ahmed, Maltzer, Zoe, McGraw, Medea, Nguyen, Thuc Nghi, Nyhus, Julie, Ojemann, Jeffrey G, Oldre, Aaron, Parry, Sheana, Reynolds, Shannon, Rimorin, Christine, Shapovalova, Nadiya V, Somasundaram, Saroja, Szafer, Aaron, Thomsen, Elliot R, Tieu, Michael, Quon, Gerald, Scheuermann, Richard H, Yuste, Rafael, Sunkin, Susan M, Lelieveldt, Boudewijn, Feng, David, Ng, Lydia, Bernard, Amy, Hawrylycz, Michael, Phillips, John W., Tasic, Bosiljka, Zeng, Hongkui, Jones, Allan R, Koch, Christof, Lein, Ed S
Veröffentlicht in Nature (2019)

An anatomic transcriptional atlas of human glioblastoma

von Puchalski, Ralph B., Shah, Nameeta, Miller, Jeremy, Dalley, Rachel, Nomura, Steve R., Yoon, Jae-Guen, Smith, Kimberly A., Lankerovich, Michael, Bertagnolli, Darren, Bickley, Kris, Boe, Andrew F., Brouner, Krissy, Butler, Stephanie, Caldejon, Shiella, Chapin, Mike, Datta, Suvro, Dee, Nick, Desta, Tsega, Dolbeare, Tim, Dotson, Nadezhda, Ebbert, Amanda, Feng, David, Feng, Xu, Fisher, Michael, Gee, Garrett, Goldy, Jeff, Gorley, Lindsey, Gregor, Benjamin W., Gu, Guangyu, Hejazinia, Nika, Hohmann, John, Hothi, Parvinder, Howard, Robert, Joines, Kevin, Kriedberg, Ali, Kuan, Leonard, Lau, Chris, Lee, Felix, Lee, Hwahyung, Lemon, Tracy, Long, Fuhui, Mastan, Naveed, Mott, Erika, Murthy, Chantal, Ngo, Kiet, Olson, Eric, Reding, Melissa, Riley, Zack, Rosen, David, Sandman, David, Shapovalova, Nadiya, Slaughterbeck, Clifford R., Sodt, Andrew, Stockdale, Graham, Szafer, Aaron, Wakeman, Wayne, Wohnoutka, Paul E., White, Steven J., Marsh, Don, Rostomily, Robert C., Ng, Lydia, Dang, Chinh, Jones, Allan, Keogh, Bart, Gittleman, Haley R., Barnholtz-Sloan, Jill S., Cimino, Patrick J., Uppin, Megha S., Keene, C. Dirk, Farrokhi, Farrokh R., Lathia, Justin D., Berens, Michael E., Iavarone, Antonio, Bernard, Amy, Lein, Ed, Phillips, John W., Rostad, Steven W., Cobbs, Charles, Hawrylycz, Michael J., Foltz, Greg D.
Veröffentlicht in Science (2018)

Transcriptional Landscape of the Prenatal Human Brain

von Miller, Jeremy A., Ding, Song-Lin, Sunkin, Susan M., Smith, Kimberly A, Ng, Lydia, Szafer, Aaron, Ebbert, Amanda, Riley, Zackery L., Aiona, Kaylynn, Arnold, James M., Bennet, Crissa, Bertagnolli, Darren, Brouner, Krissy, Butler, Stephanie, Caldejon, Shiella, Carey, Anita, Cuhaciyan, Christine, Dalley, Rachel A., Dee, Nick, Dolbeare, Tim A., Facer, Benjamin A. C., Feng, David, Fliss, Tim P., Gee, Garrett, Goldy, Jeff, Gourley, Lindsey, Gregor, Benjamin W., Gu, Guangyu, Howard, Robert E., Jochim, Jayson M., Kuan, Chihchau L., Lau, Christopher, Lee, Chang-Kyu, Lee, Felix, Lemon, Tracy A., Lesnar, Phil, McMurray, Bergen, Mastan, Naveed, Mosqueda, Nerick F., Naluai-Cecchini, Theresa, Ngo, Nhan-Kiet, Nyhus, Julie, Oldre, Aaron, Olson, Eric, Parente, Jody, Parker, Patrick D., Parry, Sheana E., Player, Allison Stevens, Pletikos, Mihovil, Reding, Melissa, Royall, Joshua J., Roll, Kate, Sandman, David, Sarreal, Melaine, Shapouri, Sheila, Shapovalova, Nadiya V., Shen, Elaine H., Sjoquist, Nathan, Slaughterbeck, Clifford R., Smith, Michael, Sodt, Andy J., Williams, Derric, Zöllei, Lilla, Fischl, Bruce, Gerstein, Mark B., Geschwind, Daniel H., Glass, Ian A., Hawrylycz, Michael J., Hevner, Robert F., Huang, Hao, Jones, Allan R., Knowles, James A., Levitt, Pat, Phillips, John W., Sestan, Nenad, Wohnoutka, Paul, Dang, Chinh, Bernard, Amy, Hohmann, John G., Lein, Ed S.
Veröffentlicht 2014

Comprehensive transcriptional map of primate brain development

von Bakken, Trygve E., Miller, Jeremy A., Ding, Song-Lin, Sunkin, Susan M., Smith, Kimberly A., Ng, Lydia, Szafer, Aaron, Dalley, Rachel A., Royall, Joshua J., Lemon, Tracy, Shapouri, Sheila, Aiona, Kaylynn, Arnold, James, Bennett, Jeffrey L., Bertagnolli, Darren, Bickley, Kristopher, Boe, Andrew, Brouner, Krissy, Butler, Stephanie, Byrnes, Emi, Caldejon, Shiella, Carey, Anita, Cate, Shelby, Chapin, Mike, Chen, Jefferey, Dee, Nick, Desta, Tsega, Dolbeare, Tim A., Dotson, Nadia, Ebbert, Amanda, Fulfs, Erich, Gee, Garrett, Gilbert, Terri L., Goldy, Jeff, Gourley, Lindsey, Gregor, Ben, Gu, Guangyu, Hall, Jon, Haradon, Zeb, Haynor, David R., Hejazinia, Nika, Hoerder-Suabedissen, Anna, Howard, Robert, Jochim, Jay, Kinnunen, Marty, Kriedberg, Ali, Kuan, Chihchau L., Lau, Christopher, Lee, Chang-Kyu, Lee, Felix, Luong, Lon, Mastan, Naveed, May, Ryan, Melchor, Jose, Mosqueda, Nerick, Mott, Erika, Ngo, Kiet, Nyhus, Julie, Oldre, Aaron, Olson, Eric, Parente, Jody, Parker, Patrick D., Parry, Sheana, Pendergraft, Julie, Potekhina, Lydia, Reding, Melissa, Riley, Zackery L., Roberts, Tyson, Rogers, Brandon, Roll, Kate, Rosen, David, Sandman, David, Sarreal, Melaine, Shapovalova, Nadiya, Shi, Shu, Sjoquist, Nathan, Sodt, Andy J., Townsend, Robbie, Velasquez, Lissette, Wagley, Udi, Wakeman, Wayne B., White, Cassandra, Bennett, Crissa, Wu, Jennifer, Young, Rob, Youngstrom, Brian L., Wohnoutka, Paul, Gibbs, Richard A., Rogers, Jeffrey, Hohmann, John G., Hawrylycz, Michael J., Hevner, Robert F., Molnár, Zoltán, Phillips, John W., Dang, Chinh, Jones, Allan R., Amaral, David G., Bernard, Amy, Lein, Ed S.
Veröffentlicht in Nature (2016)