A Bayesian method for calculating real-time quantitative PCR calibration curves using absolute plasmid DNA standards

Por Haugland Richard A, Varma Manju, Seifring Shawn, Sivaganesan Mano, Shanks Orin C
Publicado em 2008-02-01

A Bayesian method for calculating real-time quantitative PCR calibration curves using absolute plasmid DNA standards

Por Sivaganesan, Mano, Seifring, Shawn, Varma, Manju, Haugland, Richard A, Shanks, Orin C
Publicado em 2008

Quantitative PCR for Genetic Markers of Human Fecal Pollution

Por Shanks, Orin C., Kelty, Catherine A., Sivaganesan, Mano, Varma, Manju, Haugland, Richard A.
Publicado em 2009

Distribution of Genetic Marker Concentrations for Fecal Indicator Bacteria in Sewage and Animal Feces

Por Kelty, Catherine A., Varma, Manju, Sivaganesan, Mano, Haugland, Richard A., Shanks, Orin C.
Publicado em 2012

Basin-Wide Analysis of the Dynamics of Fecal Contamination and Fecal Source Identification in Tillamook Bay, Oregon

Por Shanks, Orin C., Nietch, Christopher, Simonich, Michael, Younger, Melissa, Reynolds, Don, Field, Katharine G.
Publicado em 2006

Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces

Por Shanks, Orin C., Kelty, Catherine A., Peed, Lindsay, Sivaganesan, Mano, Mooney, Thomas, Jenkins, Michael
Publicado em 2014

Evidence of Genetic Fecal Marker Interactions between Water Column and Periphyton in Artificial Streams

Por Li, Xiang, Peed, Lindsay, Sivaganesan, Mano, Kelty, Catherine A., Nietch, Christopher, Shanks, Orin C.
Publicado no ACS Omega (2018)

Competitive Metagenomic DNA Hybridization Identifies Host-Specific Microbial Genetic Markers in Cow Fecal Samples

Por Shanks, Orin C., Santo Domingo, Jorge W., Lamendella, Regina, Kelty, Catherine A., Graham, James E.
Publicado em 2006

Identification of Bacterial DNA Markers for the Detection of Human Fecal Pollution in Water

Por Shanks, Orin C., Domingo, Jorge W. Santo, Lu, Jingrang, Kelty, Catherine A., Graham, James E.
Publicado em 2007

Identification of Specialists and Abundance-Occupancy Relationships among Intestinal Bacteria of Aves, Mammalia, and Actinopterygii

Por Green, Hyatt C., Fisher, Jenny C., McLellan, Sandra L., Sogin, Mitchell L., Shanks, Orin C.
Publicado no Appl Environ Microbiol (2016)

Decay of Bacterial Pathogens, Fecal Indicators, and Real-Time Quantitative PCR Genetic Markers in Manure-Amended Soils

Por Rogers, Shane W., Donnelly, Matthew, Peed, Lindsay, Kelty, Catherine A., Mondal, Sumona, Zhong, Zirong, Shanks, Orin C.
Publicado em 2011

Biotic Interactions and Sunlight Affect Persistence of Fecal Indicator Bacteria and Microbial Source Tracking Genetic Markers in the Upper Mississippi River

Por Korajkic, Asja, McMinn, Brian R., Shanks, Orin C., Sivaganesan, Mano, Fout, G. Shay, Ashbolt, Nicholas J.
Publicado em 2014

Differential Decay of Enterococci and Escherichia coli Originating from Two Fecal Pollution Sources

Por Korajkic, Asja, McMinn, Brian R., Harwood, Valerie J., Shanks, Orin C., Fout, G. Shay, Ashbolt, Nicholas J.
Publicado em 2013

Performance Assessment PCR-Based Assays Targeting Bacteroidales Genetic Markers of Bovine Fecal Pollution

Por Shanks, Orin C., White, Karen, Kelty, Catherine A., Hayes, Sam, Sivaganesan, Mano, Jenkins, Michael, Varma, Manju, Haugland, Richard A.
Publicado em 2010

Comparison of the Microbial Community Structures of Untreated Wastewaters from Different Geographic Locales

Por Shanks, Orin C., Newton, Ryan J., Kelty, Catherine A., Huse, Susan M., Sogin, Mitchell L., McLellan, Sandra L.
Publicado em 2013

Temporal Assessment of the Impact of Exposure to Cow Feces in Two Watersheds by Multiple Host-Specific PCR Assays

Por Lee, Yong-Jin, Molina, Marirosa, Santo Domingo, Jorge W., Willis, Jonathan D., Cyterski, Michael, Endale, Dinku M., Shanks, Orin C.
Publicado em 2008

Data Acceptance Criteria for Standardized Human-Associated Fecal Source Identification Quantitative Real-Time PCR Methods

Por Shanks, Orin C., Kelty, Catherine A., Oshiro, Robin, Haugland, Richard A., Madi, Tania, Brooks, Lauren, Field, Katharine G., Sivaganesan, Mano
Publicado no Appl Environ Microbiol (2016)

Quantitative PCR for Detection and Enumeration of Genetic Markers of Bovine Fecal Pollution

Por Shanks, Orin C., Atikovic, Emina, Blackwood, A. Denene, Lu, Jingrang, Noble, Rachel T., Domingo, Jorge Santo, Seifring, Shawn, Sivaganesan, Mano, Haugland, Richard A.
Publicado em 2008

Sewage reflects the distribution of human faecal Lachnospiraceae

Por McLellan, Sandra L., Newton, Ryan J., Vandewalle, Jessica L., Shanks, Orin C., Huse, Susan M., Eren, A. Murat, Sogin, Mitchell L.
Publicado em 2013

Community Structures of Fecal Bacteria in Cattle from Different Animal Feeding Operations

Por Shanks, Orin C., Kelty, Catherine A., Archibeque, Shawn, Jenkins, Michael, Newton, Ryan J., McLellan, Sandra L., Huse, Susan M., Sogin, Mitchell L.
Publicado em 2011