Escherichia coli O157:H7 Shiga Toxin-Encoding Bacteriophages: Integrations, Excisions, Truncations, and Evolutionary Implications

por Shaikh, Nurmohammad, Tarr, Phillip I.
Publicado 2003

Escherichia coli O157:H7 Shiga Toxin-Encoding Bacteriophages: Integrations, Excisions, Truncations, and Evolutionary Implications

por Shaikh, Nurmohammad, Tarr, Phillip I.
Publicado 2003

Further evidence of constrained radiation in the evolution of pathogenic Escherichia coli O157:H7

por Leopold, Shana R., Shaikh, Nurmohammad, Tarr, Phillip I.
Publicado 2010

Droplet digital PCR quantifies host inflammatory transcripts in feces reliably and reproducibly

por Stauber, Jennifer, Shaikh, Nurmohammad, Ordiz, M Isabel, Tarr, Phillip I., Manary, Mark J
Publicado en Cell Immunol (2016)

EB 2017 Article: Interpretation of the lactulose:mannitol test in rural Malawian children at risk for perturbations in intestinal permeability

por Ordiz, M Isabel, Davitt, Caroline, Stephenson, Kevin, Agapova, Sophia, Divala, Oscar, Shaikh, Nurmohammad, Manary, Mark J
Publicado en Exp Biol Med (Maywood) (2018)

The IrgA Homologue Adhesin Iha Is an Escherichia coli Virulence Factor in Murine Urinary Tract Infection

por Johnson, James R., Jelacic, Srdjan, Schoening, Laura M., Clabots, Connie, Shaikh, Nurmohammad, Mobley, Harry L. T., Tarr, Phillip I.
Publicado 2005

Serologic Evidence of Gut-driven Systemic Inflammation in Juvenile Idiopathic Arthritis

por Fotis, Lampros, Shaikh, Nurmohammad, Baszis, Kevin W., Samson, Charles M., Lev-Tzion, Raffi, French, Anthony R., Tarr, Phillip I.
Publicado en J Rheumatol (2017)

A Method for Isolating and Analyzing Human mRNA from Newborn Stool

por Bennett, William E., González-Rivera, Rosbel, Shaikh, Nurmohammad, Magrini, Vincent, Boykin, Michelle, Warner, Barbara B., Hamvas, Aaron, Tarr, Phillip I.
Publicado 2009

Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays

por VanDussen, Kelli L, Marinshaw, Jeffrey M, Shaikh, Nurmohammad, Miyoshi, Hiroyuki, Moon, Clara, Tarr, Phillip I, Ciorba, Matthew A, Stappenbeck, Thaddeus S
Publicado en Gut (2014)

Environmental Enteric Dysfunction Is Associated With Poor Linear Growth and Can Be Identified by Host Fecal mRNAs

por Ordiz, Maria Isabel, Shaikh, Nurmohammad, Trehan, Indi, Maleta, Ken, Stauber, Jennifer, Shulman, Robert, Devaraj, Sridevi, Tarr, Phillip I., Manary, Mark J.
Publicado en J Pediatr Gastroenterol Nutr (2016)

Environmental Enteric Dysfunction Includes a Broad Spectrum of Inflammatory Responses and Epithelial Repair Processes

por Yu, Jinsheng, Ordiz, M. Isabel, Stauber, Jennifer, Shaikh, Nurmohammad, Trehan, Indi, Barnell, Erica, Head, Richard D., Maleta, Ken, Tarr, Phillip I., Manary, Mark J.
Publicado en Cell Mol Gastroenterol Hepatol (2015)

Greater Diversity of Shiga Toxin-Encoding Bacteriophage Insertion Sites among Escherichia coli O157:H7 Isolates from Cattle than in Those from Humans

por Besser, Thomas E., Shaikh, Nurmohammad, Holt, Nicholas J., Tarr, Phillip I., Konkel, Michael E., Malik-Kale, Preeti, Walsh, Coilin W., Whittam, Thomas S., Bono, James L.
Publicado 2007

Greater Diversity of Shiga Toxin-Encoding Bacteriophage Insertion Sites among Escherichia coli O157:H7 Isolates from Cattle than in Those from Humans

por Besser, Thomas E., Shaikh, Nurmohammad, Holt, Nicholas J., Tarr, Phillip I., Konkel, Michael E., Malik-Kale, Preeti, Walsh, Coilin W., Whittam, Thomas S., Bono, James L.
Publicado 2008

Bacterial DNA Content in the Intestinal Wall from Infants with Necrotizing Enterocolitis

por Bucher, Brian T., McDuffie, Lucas A., Shaikh, Nurmohammad, Tarr, Phillip I., Warner, Barbara B., Hamvas, Aaron, White, Francis V., Erwin, Christopher R., Warner, Brad W.
Publicado 2011

Precise Dissection of an Escherichia coli O157:H7 Outbreak by Single Nucleotide Polymorphism Analysis

por Turabelidze, George, Lawrence, Steven J., Gao, Hongyu, Sodergren, Erica, Weinstock, George M., Abubucker, Sahar, Wylie, Todd, Mitreva, Makedonka, Shaikh, Nurmohammad, Gautom, Romesh, Tarr, Phillip I.
Publicado 2013

Phenotypic and Genotypic Analysis of Clostridium difficile Isolates: a Single-Center Study

por Zhou, Yanjiao, Burnham, Carey-Ann D., Hink, Tiffany, Chen, Lei, Shaikh, Nurmohammad, Wollam, Aye, Sodergren, Erica, Weinstock, George M., Tarr, Phillip I., Dubberke, Erik R.
Publicado en J Clin Microbiol (2014)

Transcriptomic analysis of enteropathy in Zambian children with severe acute malnutrition

por Chama, Mubanga, Amadi, Beatrice C., Chandwe, Kanta, Zyambo, Kanekwa, Besa, Ellen, Shaikh, Nurmohammad, Ndao, I. Malick, Tarr, Philip I., Storer, Chad, Head, Richard, Kelly, Paul
Publicado en EBioMedicine (2019)

Epithelial IDO1 Modulates AHR and Notch Signaling to Increase Differentiation of Secretory Cells and Alter Mucus-Associated Microbiota

por Alvarado, David M, Chen, Baosheng, Iticovici, Micah, Thaker, Ameet I, Dai, Nattalie, VanDussen, Kelli L, Shaikh, Nurmohammad, Lim, Chai K, Guillemin, Gilles J, Tarr, Phillip I, Ciorba, Matthew A
Publicado en Gastroenterology (2019)

Transdermal fluorescence detection of a dual fluorophore system for noninvasive point-of-care gastrointestinal permeability measurement

por Dorshow, Richard B., Johnson, J. R., Debreczeny, Martin P., Riley, I. Rochelle, Shieh, Jeng-Jong, Rogers, Thomas E., Hall-Moore, Carla, Shaikh, Nurmohammad, Rouggly-Nickless, L. Colleen, Tarr, Phillip I.
Publicado en Biomed Opt Express (2019)

Proinflammatory fecal mRNA and childhood bacterial enteric infections

por Bennett, William E, González-Rivera, Rosbel, Puente, Bao N, Shaikh, Nurmohammad, Stevens, Harold J, Mooney, Jody C, Klein, Eileen J, Denno, Donna M, Draghi, Andrew, Sylvester, Francisco A, Tarr, Phillip I
Publicado 2010