Escherichia coli O157:H7 Shiga Toxin-Encoding Bacteriophages: Integrations, Excisions, Truncations, and Evolutionary Implications

par Shaikh, Nurmohammad, Tarr, Phillip I.
Publié 2003

Escherichia coli O157:H7 Shiga Toxin-Encoding Bacteriophages: Integrations, Excisions, Truncations, and Evolutionary Implications

par Shaikh, Nurmohammad, Tarr, Phillip I.
Publié 2003

Further evidence of constrained radiation in the evolution of pathogenic Escherichia coli O157:H7

par Leopold, Shana R., Shaikh, Nurmohammad, Tarr, Phillip I.
Publié 2010

Droplet digital PCR quantifies host inflammatory transcripts in feces reliably and reproducibly

par Stauber, Jennifer, Shaikh, Nurmohammad, Ordiz, M Isabel, Tarr, Phillip I., Manary, Mark J
Publié dans Cell Immunol (2016)

EB 2017 Article: Interpretation of the lactulose:mannitol test in rural Malawian children at risk for perturbations in intestinal permeability

par Ordiz, M Isabel, Davitt, Caroline, Stephenson, Kevin, Agapova, Sophia, Divala, Oscar, Shaikh, Nurmohammad, Manary, Mark J
Publié dans Exp Biol Med (Maywood) (2018)

The IrgA Homologue Adhesin Iha Is an Escherichia coli Virulence Factor in Murine Urinary Tract Infection

par Johnson, James R., Jelacic, Srdjan, Schoening, Laura M., Clabots, Connie, Shaikh, Nurmohammad, Mobley, Harry L. T., Tarr, Phillip I.
Publié 2005

Serologic Evidence of Gut-driven Systemic Inflammation in Juvenile Idiopathic Arthritis

par Fotis, Lampros, Shaikh, Nurmohammad, Baszis, Kevin W., Samson, Charles M., Lev-Tzion, Raffi, French, Anthony R., Tarr, Phillip I.
Publié dans J Rheumatol (2017)

A Method for Isolating and Analyzing Human mRNA from Newborn Stool

par Bennett, William E., González-Rivera, Rosbel, Shaikh, Nurmohammad, Magrini, Vincent, Boykin, Michelle, Warner, Barbara B., Hamvas, Aaron, Tarr, Phillip I.
Publié 2009

Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays

par VanDussen, Kelli L, Marinshaw, Jeffrey M, Shaikh, Nurmohammad, Miyoshi, Hiroyuki, Moon, Clara, Tarr, Phillip I, Ciorba, Matthew A, Stappenbeck, Thaddeus S
Publié dans Gut (2014)

Environmental Enteric Dysfunction Is Associated With Poor Linear Growth and Can Be Identified by Host Fecal mRNAs

par Ordiz, Maria Isabel, Shaikh, Nurmohammad, Trehan, Indi, Maleta, Ken, Stauber, Jennifer, Shulman, Robert, Devaraj, Sridevi, Tarr, Phillip I., Manary, Mark J.
Publié dans J Pediatr Gastroenterol Nutr (2016)

Environmental Enteric Dysfunction Includes a Broad Spectrum of Inflammatory Responses and Epithelial Repair Processes

par Yu, Jinsheng, Ordiz, M. Isabel, Stauber, Jennifer, Shaikh, Nurmohammad, Trehan, Indi, Barnell, Erica, Head, Richard D., Maleta, Ken, Tarr, Phillip I., Manary, Mark J.
Publié dans Cell Mol Gastroenterol Hepatol (2015)

Greater Diversity of Shiga Toxin-Encoding Bacteriophage Insertion Sites among Escherichia coli O157:H7 Isolates from Cattle than in Those from Humans

par Besser, Thomas E., Shaikh, Nurmohammad, Holt, Nicholas J., Tarr, Phillip I., Konkel, Michael E., Malik-Kale, Preeti, Walsh, Coilin W., Whittam, Thomas S., Bono, James L.
Publié 2007

Greater Diversity of Shiga Toxin-Encoding Bacteriophage Insertion Sites among Escherichia coli O157:H7 Isolates from Cattle than in Those from Humans

par Besser, Thomas E., Shaikh, Nurmohammad, Holt, Nicholas J., Tarr, Phillip I., Konkel, Michael E., Malik-Kale, Preeti, Walsh, Coilin W., Whittam, Thomas S., Bono, James L.
Publié 2008

Bacterial DNA Content in the Intestinal Wall from Infants with Necrotizing Enterocolitis

par Bucher, Brian T., McDuffie, Lucas A., Shaikh, Nurmohammad, Tarr, Phillip I., Warner, Barbara B., Hamvas, Aaron, White, Francis V., Erwin, Christopher R., Warner, Brad W.
Publié 2011

Precise Dissection of an Escherichia coli O157:H7 Outbreak by Single Nucleotide Polymorphism Analysis

par Turabelidze, George, Lawrence, Steven J., Gao, Hongyu, Sodergren, Erica, Weinstock, George M., Abubucker, Sahar, Wylie, Todd, Mitreva, Makedonka, Shaikh, Nurmohammad, Gautom, Romesh, Tarr, Phillip I.
Publié 2013

Phenotypic and Genotypic Analysis of Clostridium difficile Isolates: a Single-Center Study

par Zhou, Yanjiao, Burnham, Carey-Ann D., Hink, Tiffany, Chen, Lei, Shaikh, Nurmohammad, Wollam, Aye, Sodergren, Erica, Weinstock, George M., Tarr, Phillip I., Dubberke, Erik R.
Publié dans J Clin Microbiol (2014)

Transcriptomic analysis of enteropathy in Zambian children with severe acute malnutrition

par Chama, Mubanga, Amadi, Beatrice C., Chandwe, Kanta, Zyambo, Kanekwa, Besa, Ellen, Shaikh, Nurmohammad, Ndao, I. Malick, Tarr, Philip I., Storer, Chad, Head, Richard, Kelly, Paul
Publié dans EBioMedicine (2019)

Epithelial IDO1 Modulates AHR and Notch Signaling to Increase Differentiation of Secretory Cells and Alter Mucus-Associated Microbiota

par Alvarado, David M, Chen, Baosheng, Iticovici, Micah, Thaker, Ameet I, Dai, Nattalie, VanDussen, Kelli L, Shaikh, Nurmohammad, Lim, Chai K, Guillemin, Gilles J, Tarr, Phillip I, Ciorba, Matthew A
Publié dans Gastroenterology (2019)

Transdermal fluorescence detection of a dual fluorophore system for noninvasive point-of-care gastrointestinal permeability measurement

par Dorshow, Richard B., Johnson, J. R., Debreczeny, Martin P., Riley, I. Rochelle, Shieh, Jeng-Jong, Rogers, Thomas E., Hall-Moore, Carla, Shaikh, Nurmohammad, Rouggly-Nickless, L. Colleen, Tarr, Phillip I.
Publié dans Biomed Opt Express (2019)

Proinflammatory fecal mRNA and childhood bacterial enteric infections

par Bennett, William E, González-Rivera, Rosbel, Puente, Bao N, Shaikh, Nurmohammad, Stevens, Harold J, Mooney, Jody C, Klein, Eileen J, Denno, Donna M, Draghi, Andrew, Sylvester, Francisco A, Tarr, Phillip I
Publié 2010