Computational Prediction of Protein-Protein Interactions in Leishmania Predicted Proteomes

Por Rezende, Antonio M., Folador, Edson L., Resende, Daniela de M., Ruiz, Jeronimo C.
Publicado em 2012

Draft Genome Sequence of Streptococcus equinus (Streptococcus bovis) HC5, a Lantibiotic Producer from the Bovine Rumen

Por Azevedo, Analice C., Bento, Cláudia B. P., Ruiz, Jeronimo C., Queiroz, Marisa V., Mantovani, Hilário C.
Publicado no Genome Announc (2015)

Distribution and Genetic Diversity of Bacteriocin Gene Clusters in Rumen Microbial Genomes

Por Azevedo, Analice C., Bento, Cláudia B. P., Ruiz, Jeronimo C., Queiroz, Marisa V., Mantovani, Hilário C.
Publicado no Appl Environ Microbiol (2015)

Eukaryotic Protein Kinases (ePKs) of the Helminth Parasite Schistosoma mansoni

Por Andrade, Luiza F, Nahum, Laila A, Avelar, Lívia GA, Silva, Larissa L, Zerlotini, Adhemar, Ruiz, Jerônimo C, Oliveira, Guilherme
Publicado em 2011

SchistoDB: a Schistosoma mansoni genome resource

Por Zerlotini, Adhemar, Heiges, Mark, Wang, Haiming, Moraes, Romulo L. V., Dominitini, Anderson J., Ruiz, Jerônimo C., Kissinger, Jessica C., Oliveira, Guilherme
Publicado em 2009

Identification of a fibrinogen-related protein (FBN9) gene in neotropical anopheline mosquitoes

Por Oliveira, Sabrina B, Ibraim, Izabela C, Tadei, Wanderli P, Ruiz, Jeronimo C, Nahum, Laila A, Brito, Cristiana FA, Moreira, Luciano A
Publicado em 2011

An assessment on epitope prediction methods for protozoa genomes

Por Resende, Daniela M, Rezende, Antônio M, Oliveira, Nesley JD, Batista, Izabella CA, Corrêa-Oliveira, Rodrigo, Reis, Alexandre B, Ruiz, Jeronimo C
Publicado em 2012

New Trypanosoma cruzi Repeated Element That Shows Site Specificity for Insertion

Por Souza, Renata T., Santos, Márcia R. M., Lima, Fábio M., El-Sayed, Najib M., Myler, Peter J., Ruiz, Jeronimo C., da Silveira, José Franco
Publicado em 2007

Molecular characterization of the hexose transporter gene in benznidazole resistant and susceptible populations of Trypanosoma cruzi

Por dos Santos, Paula F, Ruiz, Jerônimo C, Soares, Rodrigo P P, Moreira, Douglas S, Rezende, Antônio M, Folador, Edson L, Oliveira, Guilherme, Romanha, Alvaro J, Murta, Silvane MF
Publicado em 2012

Identification and characterization of Tc1/mariner-like DNA transposons in genomes of the pathogenic fungi of the Paracoccidioides species complex

Por Marini, Marjorie M, Zanforlin, Tamiris, Santos, Patrícia C, Barros, Roberto RM, Guerra, Anne CP, Puccia, Rosana, Felipe, Maria SS, Brigido, Marcelo, Soares, Célia MA, Ruiz, Jerônimo C, Silveira, José F, Cisalpino, Patrícia S
Publicado em 2010

The Repetitive Cytoskeletal Protein H49 of Trypanosoma cruzi Is a Calpain-Like Protein Located at the Flagellum Attachment Zone

Por Galetović, Alexandra, Souza, Renata T., Santos, Marcia R. M., Cordero, Esteban M., Bastos, Izabela M. D., Santana, Jaime M., Ruiz, Jeronimo C., Lima, Fabio M., Marini, Marjorie M., Mortara, Renato A., da Silveira, José Franco
Publicado em 2011

Anatomy and evolution of telomeric and subtelomeric regions in the human protozoan parasite Trypanosoma cruzi

Por Moraes Barros, Roberto R, Marini, Marjorie M, Antônio, Cristiane Regina, Cortez, Danielle R, Miyake, Andrea M, Lima, Fábio M, Ruiz, Jeronimo C, Bartholomeu, Daniella C, Chiurillo, Miguel A, Ramirez, José Luis, da Silveira, José Franco
Publicado em 2012

Genome sequence of the model sulfate reducer Desulfovibrio gigas: a comparative analysis within the Desulfovibrio genus*

Por Morais-Silva, Fabio O, Rezende, Antonio Mauro, Pimentel, Catarina, Santos, Catia I, Clemente, Carla, Varela–Raposo, Ana, Resende, Daniela M, da Silva, Sofia M, de Oliveira, Luciana Márcia, Matos, Marcia, Costa, Daniela A, Flores, Orfeu, Ruiz, Jerónimo C, Rodrigues-Pousada, Claudina
Publicado no Microbiologyopen (2014)

Genomics of Ecological Adaptation in Cactophilic Drosophila

Por Guillén, Yolanda, Rius, Núria, Delprat, Alejandra, Williford, Anna, Muyas, Francesc, Puig, Marta, Casillas, Sònia, Ràmia, Miquel, Egea, Raquel, Negre, Barbara, Mir, Gisela, Camps, Jordi, Moncunill, Valentí, Ruiz-Ruano, Francisco J., Cabrero, Josefa, de Lima, Leonardo G., Dias, Guilherme B., Ruiz, Jeronimo C., Kapusta, Aurélie, Garcia-Mas, Jordi, Gut, Marta, Gut, Ivo G., Torrents, David, Camacho, Juan P., Kuhn, Gustavo C.S., Feschotte, Cédric, Clark, Andrew G., Betrán, Esther, Barbadilla, Antonio, Ruiz, Alfredo
Publicado no Genome Biol Evol (2014)

Comparative genomic analysis of three Leishmania species that cause diverse human disease

Por Peacock, Christopher S, Seeger, Kathy, Harris, David, Murphy, Lee, Ruiz, Jeronimo C, Quail, Michael A, Peters, Nick, Adlem, Ellen, Tivey, Adrian, Aslett, Martin, Kerhornou, Arnaud, Ivens, Alasdair, Fraser, Audrey, Rajandream, Marie-Adele, Carver, Tim, Norbertczak, Halina, Chillingworth, Tracey, Hance, Zahra, Jagels, Kay, Moule, Sharon, Ormond, Doug, Rutter, Simon, Squares, Rob, Whitehead, Sally, Rabbinowitsch, Ester, Arrowsmith, Claire, White, Brian, Thurston, Scott, Bringaud, Frédéric, Baldauf, Sandra L, Faulconbridge, Adam, Jeffares, Daniel, Depledge, Daniel P, Oyola, Samuel O, Hilley, James D, Brito, Loislene O, Tosi, Luiz R O, Barrell, Barclay, Cruz, Angela K, Mottram, Jeremy C, Smith, Deborah F, Berriman, Matthew
Publicado em 2007

Complete Genome Sequence of Type Strain Campylobacter fetus subsp. venerealis NCTC 10354(T)

Por Stynen, Ana Paula Reinato, Lage, Andrey Pereira, Moore, Robert J., Rezende, Antonio Mauro, de Resende, Vivian D'Afonseca da Silva, Ruy, Patricia de Cássia, Daher, Nesley, Resende, Daniela de Melo, de Almeida, Sintia Silva, Soares, Siomar de Castro, de Abreu, Vinicius Augusto Carvalho, Rocha, Aryane Aparecida C. Magalhães, dos Santos, Anderson Rodrigues, Barbosa, Eudes Guilherme Vieira, Costa, Danielle Fonseca, Dorella, Fernanda Alves, Miyoshi, Anderson, de Lima, Alex Ranieri Jerônimo, Campos, Frederico Davi da Silva, de Sá, Pablo Gomes, Lopes, Thiago Souza, Rodrigues, Ryan Mauricio Araujo, Carneiro, Adriana Ribeiro, Leão, Thiago, Cerdeira, Louise Teixeira, Ramos, Rommel Thiago Jucá, Silva, Artur, Azevedo, Vasco, Ruiz, Jerônimo C.
Publicado em 2011

Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis

Por Teixeira, Marcus M, de Almeida, Luiz GP, Kubitschek-Barreira, Paula, Alves, Fernanda L, Kioshima, Érika S, Abadio, Ana KR, Fernandes, Larissa, Derengowski, Lorena S, Ferreira, Karen S, Souza, Rangel C, Ruiz, Jeronimo C, de Andrade, Nathalia C, Paes, Hugo C, Nicola, André M, Albuquerque, Patrícia, Gerber, Alexandra L, Martins, Vicente P, Peconick, Luisa DF, Neto, Alan Viggiano, Chaucanez, Claudia B, Silva, Patrícia A, Cunha, Oberdan L, de Oliveira, Fabiana FM, dos Santos, Tayná C, Barros, Amanda LN, Soares, Marco A, de Oliveira, Luciana M, Marini, Marjorie M, Villalobos-Duno, Héctor, Cunha, Marcel ML, de Hoog, Sybren, da Silveira, José F, Henrissat, Bernard, Niño-Vega, Gustavo A, Cisalpino, Patrícia S, Mora-Montes, Héctor M, Almeida, Sandro R, Stajich, Jason E, Lopes-Bezerra, Leila M, Vasconcelos, Ana TR, Felipe, Maria SS
Publicado no BMC Genomics (2014)

Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains

Por Ruiz, Jerônimo C., D'Afonseca, Vívian, Silva, Artur, Ali, Amjad, Pinto, Anne C., Santos, Anderson R., Rocha, Aryanne A. M. C., Lopes, Débora O., Dorella, Fernanda A., Pacheco, Luis G. C., Costa, Marcília P., Turk, Meritxell Z., Seyffert, Núbia, Moraes, Pablo M. R. O., Soares, Siomar C., Almeida, Sintia S., Castro, Thiago L. P., Abreu, Vinicius A. C., Trost, Eva, Baumbach, Jan, Tauch, Andreas, Schneider, Maria Paula C., McCulloch, John, Cerdeira, Louise T., Ramos, Rommel T. J., Zerlotini, Adhemar, Dominitini, Anderson, Resende, Daniela M., Coser, Elisângela M., Oliveira, Luciana M., Pedrosa, André L., Vieira, Carlos U., Guimarães, Cláudia T., Bartholomeu, Daniela C., Oliveira, Diana M., Santos, Fabrício R., Rabelo, Élida Mara, Lobo, Francisco P., Franco, Glória R., Costa, Ana Flávia, Castro, Ieso M., Dias, Sílvia Regina Costa, Ferro, Jesus A., Ortega, José Miguel, Paiva, Luciano V., Goulart, Luiz R., Almeida, Juliana Franco, Ferro, Maria Inês T., Carneiro, Newton P., Falcão, Paula R. K., Grynberg, Priscila, Teixeira, Santuza M. R., Brommonschenkel, Sérgio, Oliveira, Sérgio C., Meyer, Roberto, Moore, Robert J., Miyoshi, Anderson, Oliveira, Guilherme C., Azevedo, Vasco
Publicado em 2011

The Genome of the Kinetoplastid Parasite, Leishmania major

Por Ivens, Alasdair C., Peacock, Christopher S., Worthey, Elizabeth A., Murphy, Lee, Aggarwal, Gautam, Berriman, Matthew, Sisk, Ellen, Rajandream, Marie-Adele, Adlem, Ellen, Aert, Rita, Anupama, Atashi, Apostolou, Zina, Attipoe, Philip, Bason, Nathalie, Bauser, Christopher, Beck, Alfred, Beverley, Stephen M., Bianchettin, Gabriella, Borzym, Katja, Bothe, Gordana, Bruschi, Carlo V., Collins, Matt, Cadag, Eithon, Ciarloni, Laura, Clayton, Christine, Coulson, Richard M. R., Cronin, Ann, Cruz, Angela K., Davies, Robert M., Gaudenzi, Javier De, Dobson, Deborah E., Duesterhoeft, Andreas, Fazelina, Gholam, Fosker, Nigel, Frasch, Alberto Carlos, Fraser, Audrey, Fuchs, Monika, Gabel, Claudia, Goble, Arlette, Goffeau, André, Harris, David, Hertz-Fowler, Christiane, Hilbert, Helmut, Horn, David, Huang, Yiting, Klages, Sven, Knights, Andrew, Kube, Michael, Larke, Natasha, Litvin, Lyudmila, Lord, Angela, Louie, Tin, Marra, Marco, Masuy, David, Matthews, Keith, Michaeli, Shulamit, Mottram, Jeremy C., Müller-Auer, Silke, Munden, Heather, Nelson, Siri, Norbertczak, Halina, Oliver, Karen, O'Neil, Susan, Pentony, Martin, Pohl, Thomas M., Price, Claire, Purnelle, Bénédicte, Quail, Michael A., Rabbinowitsch, Ester, Reinhardt, Richard, Rieger, Michael, Rinta, Joel, Robben, Johan, Robertson, Laura, Ruiz, Jeronimo C., Rutter, Simon, Saunders, David, Schäfer, Melanie, Schein, Jacquie, Schwartz, David C., Seeger, Kathy, Seyler, Amber, Sharp, Sarah, Shin, Heesun, Sivam, Dhileep, Squares, Rob, Squares, Steve, Tosato, Valentina, Vogt, Christy, Volckaert, Guido, Wambutt, Rolf, Warren, Tim, Wedler, Holger, Woodward, John, Zhou, Shiguo, Zimmermann, Wolfgang, Smith, Deborah F., Blackwell, Jenefer M., Stuart, Kenneth D., Barrell, Bart, Myler, Peter J.
Publicado em 2005