ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequences

著者: Pesole Graziano, Rizzi Raffaella, Bonizzoni Paola
出版事項 2005-10-01

ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequences

著者: Bonizzoni, Paola, Rizzi, Raffaella, Pesole, Graziano
出版事項 2005

Modeling Alternative Splicing Variants from RNA-Seq Data with Isoform Graphs

著者: Beretta, Stefano, Bonizzoni, Paola, Vedova, Gianluca Della, Pirola, Yuri, Rizzi, Raffaella
出版事項 2014

PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text

著者: Pirola, Yuri, Rizzi, Raffaella, Picardi, Ernesto, Pesole, Graziano, Della Vedova, Gianluca, Bonizzoni, Paola
出版事項 2012

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

著者: Denti, Luca, Rizzi, Raffaella, Beretta, Stefano, Vedova, Gianluca Della, Previtali, Marco, Bonizzoni, Paola
出版年 BMC Bioinformatics (2018)

Shark: fishing relevant reads in an RNA-Seq sample

著者: Denti, Luca, Pirola, Yuri, Previtali, Marco, Ceccato, Tamara, Della Vedova, Gianluca, Rizzi, Raffaella, Bonizzoni, Paola
出版年 Bioinformatics (2020)

ASPIC: a web resource for alternative splicing prediction and transcript isoforms characterization

著者: Castrignanò, Tiziana, Rizzi, Raffaella, Talamo, Ivano Giuseppe, De Meo, Paolo D'Onorio, Anselmo, Anna, Bonizzoni, Paola, Pesole, Graziano
出版事項 2006

Protein Kinase A Activation Promotes Cancer Cell Resistance to Glucose Starvation and Anoikis

著者: Palorini, Roberta, Votta, Giuseppina, Pirola, Yuri, De Vitto, Humberto, De Palma, Sara, Airoldi, Cristina, Vasso, Michele, Ricciardiello, Francesca, Lombardi, Pietro Paolo, Cirulli, Claudia, Rizzi, Raffaella, Nicotra, Francesco, Hiller, Karsten, Gelfi, Cecilia, Alberghina, Lilia, Chiaradonna, Ferdinando
出版年 PLoS Genet (2016)

ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing

著者: Martelli, Pier L., D’Antonio, Mattia, Bonizzoni, Paola, Castrignanò, Tiziana, D’Erchia, Anna M., D’Onorio De Meo, Paolo, Fariselli, Piero, Finelli, Michele, Licciulli, Flavio, Mangiulli, Marina, Mignone, Flavio, Pavesi, Giulio, Picardi, Ernesto, Rizzi, Raffaella, Rossi, Ivan, Valletti, Alessio, Zauli, Andrea, Zambelli, Federico, Casadio, Rita, Pesole, Graziano
出版事項 2011