Shark: fishing relevant reads in an RNA-Seq sample

MOTIVATION: Recent advances in high-throughput RNA-Seq technologies allow to produce massive datasets. When a study focuses only on a handful of genes, most reads are not relevant and degrade the performance of the tools used to analyze the data. Removing irrelevant reads from the input dataset lead...

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Détails bibliographiques
Publié dans:Bioinformatics
Auteurs principaux: Denti, Luca, Pirola, Yuri, Previtali, Marco, Ceccato, Tamara, Della Vedova, Gianluca, Rizzi, Raffaella, Bonizzoni, Paola
Format: Artigo
Langue:Inglês
Publié: Oxford University Press 2020
Sujets:
Original Papers
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC8088329/
https://ncbi.nlm.nih.gov/pubmed/32926128
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa779
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