Computational classification of MocR transcriptional regulators into subgroups as a support for experimental and functional characterization

por Pascarella, Stefano
Publicado en Bioinformation (2019)

Structural mimicry between SLA/LP and Rickettsia surface antigens as a driver of autoimmune hepatitis: insights from an in silico study

por Paiardini, Alessandro, Pascarella, Stefano
Publicado 2013

CAMPO, SCR_FIND and CHC_FIND: a suite of web tools for computational structural biology

por Paiardini, Alessandro, Bossa, Francesco, Pascarella, Stefano
Publicado 2005

Evolutionarily conserved regions and hydrophobic contacts at the superfamily level: The case of the fold-type I, pyridoxal-5′-phosphate-dependent enzymes

por Paiardini, Alessandro, Bossa, Francesco, Pascarella, Stefano
Publicado 2004

Conformational transitions induced by γ-amino butyrate binding in GabR, a bacterial transcriptional regulator

por Frezzini, Mario, Guidoni, Leonardo, Pascarella, Stefano
Publicado en Sci Rep (2019)

"Hot cores" in proteins: Comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms

por Paiardini, Alessandro, Sali, Riccardo, Bossa, Francesco, Pascarella, Stefano
Publicado 2008

Structural adaptation of extreme halophilic proteins through decrease of conserved hydrophobic contact surface

por Siglioccolo, Alessandro, Paiardini, Alessandro, Piscitelli, Maria, Pascarella, Stefano
Publicado 2011

PyMod: sequence similarity searches, multiple sequence-structure alignments, and homology modeling within PyMOL

por Bramucci, Emanuele, Paiardini, Alessandro, Bossa, Francesco, Pascarella, Stefano
Publicado 2012

Type I pyridoxal 5′-phosphate dependent enzymatic domains embedded within multimodular nonribosomal peptide synthetase and polyketide synthase assembly lines

por Milano, Teresa, Paiardini, Alessandro, Grgurina, Ingeborg, Pascarella, Stefano
Publicado 2013

SARS-Cov-2 ORF3a: Mutability and function

por Bianchi, Martina, Borsetti, Alessandra, Ciccozzi, Massimo, Pascarella, Stefano
Publicado en Int J Biol Macromol (2021)

Serine Hydroxymethyltransferase from the Cold Adapted Microorganism Psychromonas ingrahamii: A Low Temperature Active Enzyme with Broad Substrate Specificity

por Angelaccio, Sebastiana, Florio, Rita, Consalvi, Valerio, Festa, Guido, Pascarella, Stefano
Publicado 2012

Molecular dynamics simulation unveils the conformational flexibility of the interdomain linker in the bacterial transcriptional regulator GabR from Bacillus subtilis bound to pyrid...

por Milano, Teresa, Gulzar, Adnan, Narzi, Daniele, Guidoni, Leonardo, Pascarella, Stefano
Publicado en PLoS One (2017)

COVID‐2019: The role of the nsp2 and nsp3 in its pathogenesis

por Angeletti, Silvia, Benvenuto, Domenico, Bianchi, Martina, Giovanetti, Marta, Pascarella, Stefano, Ciccozzi, Massimo
Publicado en J Med Virol (2020)

Sars-CoV-2 Envelope and Membrane Proteins: Structural Differences Linked to Virus Characteristics?

por Bianchi, Martina, Benvenuto, Domenico, Giovanetti, Marta, Angeletti, Silvia, Ciccozzi, Massimo, Pascarella, Stefano
Publicado en Biomed Res Int (2020)

Response to Ribeiro da Silva et al,“Role of nonstructural proteins in the pathogenesis of SARS‐CoV‐2”

por Ciccozzi, Massimo, Benvenuto, Domenico, Giovanetti, Marta, Bianchi, Martina, Pascarella, Stefano, Angeletti, Silvia
Publicado en J Med Virol (2020)

A Bioinformatics Analysis Reveals a Group of MocR Bacterial Transcriptional Regulators Linked to a Family of Genes Coding for Membrane Proteins

por Milano, Teresa, Angelaccio, Sebastiana, Tramonti, Angela, Di Salvo, Martino Luigi, Contestabile, Roberto, Pascarella, Stefano
Publicado en Biochem Res Int (2016)

Data from computational analysis of the peptide linkers in the MocR bacterial transcriptional regulators

por Angelaccio, Sebastiana, Milano, Teresa, Tramonti, Angela, Di Salvo, Martino Luigi, Contestabile, Roberto, Pascarella, Stefano
Publicado en Data Brief (2016)

Structural properties of the linkers connecting the N- and C- terminal domains in the MocR bacterial transcriptional regulators

por Milano, Teresa, Angelaccio, Sebastiana, Tramonti, Angela, Di Salvo, Martino Luigi, Contestabile, Roberto, Pascarella, Stefano
Publicado en Biochim Open (2016)

Evolutionary analysis of SARS-CoV-2: how mutation of Non-Structural Protein 6 (NSP6) could affect viral autophagy

por Benvenuto, Domenico, Angeletti, Silvia, Giovanetti, Marta, Bianchi, Martina, Pascarella, Stefano, Cauda, Roberto, Ciccozzi, Massimo, Cassone, Antonio
Publicado en J Infect (2020)

Evidence for mutations in SARS‐CoV‐2 Italian isolates potentially affecting virus transmission

por Benvenuto, Domenico, Demir, Ayse Banu, Giovanetti, Marta, Bianchi, Martina, Angeletti, Silvia, Pascarella, Stefano, Cauda, Roberto, Ciccozzi, Massimo, Cassone, Antonio
Publicado en J Med Virol (2020)