Single-cell sequencing provides clues about the host interactions of segmented filamentous bacteria (SFB)

Por Pamp, Sünje J., Harrington, Eoghan D., Quake, Stephen R., Relman, David A., Blainey, Paul C.
Publicado em 2012

Development of Spatial Distribution Patterns by Biofilm Cells

Por Haagensen, Janus A. J., Hansen, Susse K., Christensen, Bjarke B., Pamp, Sünje J., Molin, Søren
Publicado no Appl Environ Microbiol (2015)

Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition

Por Knudsen, Berith E., Bergmark, Lasse, Munk, Patrick, Lukjancenko, Oksana, Priemé, Anders, Aarestrup, Frank M., Pamp, Sünje J.
Publicado no mSystems (2016)

Nasal microenvironments and interspecific interactions influence nasal microbiota complexity and S. aureus carriage

Por Yan, Miling, Pamp, Sünje J., Fukuyama, Julia, Hwang, Peter H., Cho, Do-Yeon, Holmes, Susan, Relman, David A.
Publicado em 2013

Gut Immune Maturation Depends on Colonization with a Host-Specific Microbiota

Por Chung, Hachung, Pamp, Sünje J., Hill, Jonathan A., Surana, Neeraj K., Edelman, Sanna M., Troy, Erin B., Reading, Nicola C., Villablanca, Eduardo J., Wang, Sen, Mora, Jorge R., Umesaki, Yoshinori, Mathis, Diane, Benoist, Christophe, Relman, David A., Kasper, Dennis L.
Publicado em 2012

Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach

Por Hendriksen, Rene S., Lukjancenko, Oksana, Munk, Patrick, Hjelmsø, Mathis H., Verani, Jennifer R., Ng’eno, Eric, Bigogo, Godfrey, Kiplangat, Samuel, Oumar, Traoré, Bergmark, Lasse, Röder, Timo, Neatherlin, John C., Clayton, Onyango, Hald, Tine, Karlsmose, Susanne, Pamp, Sünje J., Fields, Barry, Montgomery, Joel M., Aarestrup, Frank M.
Publicado no PLoS One (2019)

Proficiency Testing of Metagenomics-Based Detection of Food-Borne Pathogens Using a Complex Artificial Sequencing Dataset

Por Höper, Dirk, Grützke, Josephine, Brinkmann, Annika, Mossong, Joël, Matamoros, Sébastien, Ellis, Richard J., Deneke, Carlus, Tausch, Simon H., Cuesta, Isabel, Monzón, Sara, Juliá, Miguel, Petersen, Thomas Nordahl, Hendriksen, Rene S., Pamp, Sünje J., Leijon, Mikael, Hakhverdyan, Mikhayil, Walsh, Aaron M., Cotter, Paul D., Chandrasekaran, Lakshmi, Tay, Moon Y. F., Schlundt, Joergen, Sala, Claudia, De Cesare, Alessandra, Nitsche, Andreas, Beer, Martin, Wylezich, Claudia
Publicado no Front Microbiol (2020)

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Por Hendriksen, Rene S., Munk, Patrick, Njage, Patrick, van Bunnik, Bram, McNally, Luke, Lukjancenko, Oksana, Röder, Timo, Nieuwenhuijse, David, Pedersen, Susanne Karlsmose, Kjeldgaard, Jette, Kaas, Rolf S., Clausen, Philip Thomas Lanken Conradsen, Vogt, Josef Korbinian, Leekitcharoenphon, Pimlapas, van de Schans, Milou G. M., Zuidema, Tina, de Roda Husman, Ana Maria, Rasmussen, Simon, Petersen, Bent, Amid, Clara, Cochrane, Guy, Sicheritz-Ponten, Thomas, Schmitt, Heike, Alvarez, Jorge Raul Matheu, Aidara-Kane, Awa, Pamp, Sünje J., Lund, Ole, Hald, Tine, Woolhouse, Mark, Koopmans, Marion P., Vigre, Håkan, Petersen, Thomas Nordahl, Aarestrup, Frank M.
Publicado no Nat Commun (2019)