Changes in hydration structure are necessary for collective motions of a multi-domain protein

af Oroguchi, Tomotaka, Nakasako, Masayoshi
Udgivet i Sci Rep (2016)

Influences of lone-pair electrons on directionality of hydrogen bonds formed by hydrophilic amino acid side chains in molecular dynamics simulation

af Oroguchi, Tomotaka, Nakasako, Masayoshi
Udgivet i Sci Rep (2017)

Data processing software suite SITENNO for coherent X-ray diffraction imaging using the X-ray free-electron laser SACLA

af Sekiguchi, Yuki, Oroguchi, Tomotaka, Takayama, Yuki, Nakasako, Masayoshi
Udgivet i J Synchrotron Radiat (2014)

Combination of coarse-grained molecular dynamics simulations and small-angle X-ray scattering experiments

af Ekimoto, Toru, Kokabu, Yuichi, Oroguchi, Tomotaka, Ikeguchi, Mitsunori
Udgivet i Biophys Physicobiol (2019)

Intrinsic Dynamics of Restriction Endonuclease EcoO109I Studied by Molecular Dynamics Simulations and X-Ray Scattering Data Analysis

af Oroguchi, Tomotaka, Hashimoto, Hiroshi, Shimizu, Toshiyuki, Sato, Mamoru, Ikeguchi, Mitsunori
Udgivet 2009

Shot-by-shot characterization of focused X-ray free electron laser pulses

af Kobayashi, Amane, Sekiguchi, Yuki, Oroguchi, Tomotaka, Yamamoto, Masaki, Nakasako, Masayoshi
Udgivet i Sci Rep (2018)

Domain Organization in Plant Blue-Light Receptor Phototropin2 of Arabidopsis thaliana Studied by Small-Angle X-ray Scattering

af Nakasako, Masayoshi, Oide, Mao, Takayama, Yuki, Oroguchi, Tomotaka, Okajima, Koji
Udgivet i Int J Mol Sci (2020)

Signal enhancement and Patterson-search phasing for high-spatial-resolution coherent X-ray diffraction imaging of biological objects

af Takayama, Yuki, Maki-Yonekura, Saori, Oroguchi, Tomotaka, Nakasako, Masayoshi, Yonekura, Koji
Udgivet i Sci Rep (2015)

Blue Light-excited Light-Oxygen-Voltage-sensing Domain 2 (LOV2) Triggers a Rearrangement of the Kinase Domain to Induce Phosphorylation Activity in Arabidopsis Phototropin1

af Oide, Mao, Okajima, Koji, Kashojiya, Sachiko, Takayama, Yuki, Oroguchi, Tomotaka, Hikima, Takaaki, Yamamoto, Masaki, Nakasako, Masayoshi
Udgivet i J Biol Chem (2016)

Specimen preparation for cryogenic coherent X-ray diffraction imaging of biological cells and cellular organelles by using the X-ray free-electron laser at SACLA

af Kobayashi, Amane, Sekiguchi, Yuki, Oroguchi, Tomotaka, Okajima, Koji, Fukuda, Asahi, Oide, Mao, Yamamoto, Masaki, Nakasako, Masayoshi
Udgivet i J Synchrotron Radiat (2016)

Methods and application of coherent X-ray diffraction imaging of noncrystalline particles

af Nakasako, Masayoshi, Kobayashi, Amane, Takayama, Yuki, Asakura, Kenta, Oide, Mao, Okajima, Koji, Oroguchi, Tomotaka, Yamamoto, Masaki
Udgivet i Biophys Rev (2020)

Blue light–excited LOV1 and LOV2 domains cooperatively regulate the kinase activity of full-length phototropin2 from Arabidopsis

af Oide, Mao, Okajima, Koji, Nakagami, Hirofumi, Kato, Takayuki, Sekiguchi, Yuki, Oroguchi, Tomotaka, Hikima, Takaaki, Yamamoto, Masaki, Nakasako, Masayoshi
Udgivet i J Biol Chem (2018)

Common architectures in cyanobacteria Prochlorococcus cells visualized by X-ray diffraction imaging using X-ray free electron laser

af Kobayashi, Amane, Takayama, Yuki, Hirakawa, Takeshi, Okajima, Koji, Oide, Mao, Oroguchi, Tomotaka, Inui, Yayoi, Yamamoto, Masaki, Matsunaga, Sachihiro, Nakasako, Masayoshi
Udgivet i Sci Rep (2021)

Fission Yeast Swi5-Sfr1 Protein Complex, an Activator of Rad51 Recombinase, Forms an Extremely Elongated Dogleg-shaped Structure

af Kokabu, Yuichi, Murayama, Yasuto, Kuwabara, Naoyuki, Oroguchi, Tomotaka, Hashimoto, Hiroshi, Tsutsui, Yasuhiro, Nozaki, Naohito, Akashi, Satoko, Unzai, Satoru, Shimizu, Toshiyuki, Iwasaki, Hiroshi, Sato, Mamoru, Ikeguchi, Mitsunori
Udgivet 2011

Light-induced Conformational Changes of LOV1 (Light Oxygen Voltage-sensing Domain 1) and LOV2 Relative to the Kinase Domain and Regulation of Kinase Activity in Chlamydomonas Photo...

af Okajima, Koji, Aihara, Yusuke, Takayama, Yuki, Nakajima, Mihoko, Kashojiya, Sachiko, Hikima, Takaaki, Oroguchi, Tomotaka, Kobayashi, Amane, Sekiguchi, Yuki, Yamamoto, Masaki, Suzuki, Tomomi, Nagatani, Akira, Nakasako, Masayoshi, Tokutomi, Satoru
Udgivet 2014