Promoter Prediction on a Genomic Scale—The Adh Experience

Por Ohler, Uwe
Publicado em 2000

Identification of core promoter modules in Drosophila and their application in accurate transcription start site prediction

Por Ohler, Uwe
Publicado em 2006

Using machine learning to identify disease-relevant regulatory RNAs

Por Ohler, Uwe
Publicado em 2013

Strategies for Identifying RNA Splicing Regulatory Motifs and Predicting Alternative Splicing Events

Por Holste, Dirk, Ohler, Uwe
Publicado em 2008

Mapping the complexity of transcription control in higher eukaryotes

Por Tomancak, Pavel, Ohler, Uwe
Publicado em 2010

Spatial preferences of microRNA targets in 3' untranslated regions

Por Majoros, William H, Ohler, Uwe
Publicado em 2007

Complexity reduction in context-dependent DNA substitution models

Por Majoros, William H., Ohler, Uwe
Publicado em 2009

Promoting developmental transcription

Por Ohler, Uwe, Wassarman, David A.
Publicado em 2010

Modeling the Evolution of Regulatory Elements by Simultaneous Detection and Alignment with Phylogenetic Pair HMMs

Por Majoros, William H., Ohler, Uwe
Publicado em 2010

Assessing the Utility of Thermodynamic Features for microRNA Target Prediction under Relaxed Seed and No Conservation Requirements

Por Lekprasert, Parawee, Mayhew, Michael, Ohler, Uwe
Publicado em 2011

Sustained-input switches for transcription factors and microRNAs are central building blocks of eukaryotic gene circuits

Por Megraw, Molly, Mukherjee, Sayan, Ohler, Uwe
Publicado em 2013

COUGER—co-factors associated with uniquely-bound genomic regions

Por Munteanu, Alina, Ohler, Uwe, Gordân, Raluca
Publicado em 2014

Finding RNA structure in the unstructured RBPome

Por Orenstein, Yaron, Ohler, Uwe, Berger, Bonnie
Publicado no BMC Genomics (2018)

Recognition of Unknown Conserved Alternatively Spliced Exons

Por Ohler, Uwe, Shomron, Noam, Burge, Christopher B
Publicado em 2005

Phylogenetic simulation of promoter evolution: estimation and modeling of binding site turnover events and assessment of their impact on alignment tools

Por Huang, Weichun, Nevins, Joseph R, Ohler, Uwe
Publicado em 2007

Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships

Por Yokoyama, Ken Daigoro, Ohler, Uwe, Wray, Gregory A.
Publicado em 2009

An alignment-free method to identify candidate orthologous enhancers in multiple Drosophila genomes

Por Arunachalam, Manonmani, Jayasurya, Karthik, Tomancak, Pavel, Ohler, Uwe
Publicado em 2010

Automatic Annotation of Spatial Expression Patterns via Sparse Bayesian Factor Models

Por Pruteanu-Malinici, Iulian, Mace, Daniel L., Ohler, Uwe
Publicado em 2011

Automated annotation of gene expression image sequences via non-parametric factor analysis and conditional random fields

Por Pruteanu-Malinici, Iulian, Majoros, William H., Ohler, Uwe
Publicado em 2013

Optimized mixed Markov models for motif identification

Por Huang, Weichun, Umbach, David M, Ohler, Uwe, Li, Leping
Publicado em 2006