Blunt-ended telomeres: an alternative ending to the replication and end protection stories

Por Nelson, Andrew D.L., Shippen, Dorothy E.
Publicado em 2012

Evolution of TERT-interacting lncRNAs: expanding the regulatory landscape of telomerase

Por Nelson, Andrew D. L., Shippen, Dorothy E.
Publicado no Front Genet (2015)

Dyskerin Is a Component of the Arabidopsis Telomerase RNP Required for Telomere Maintenance

Por Kannan, Kalpana, Nelson, Andrew D. L., Shippen, Dorothy E.
Publicado em 2008

A Transposable Element within the Non-canonical Telomerase RNA of Arabidopsis thaliana Modulates Telomerase in Response to DNA Damage

Por Xu, Hengyi, Nelson, Andrew D. L., Shippen, Dorothy E.
Publicado no PLoS Genet (2015)

Tail Wags the Dog? Functional Gene Classes Driving Genome-Wide GC Content in Plasmodium spp.

Por Castillo, Andreina I, Nelson, Andrew D L, Lyons, Eric
Publicado no Genome Biol Evol (2019)

Biased Gene Retention in the Face of Introgression Obscures Species Relationships

Por Forsythe, Evan S, Nelson, Andrew D L, Beilstein, Mark A
Publicado no Genome Biol Evol (2020)

Resolving the Fluorescence Response of E. coli Carbamoyl Phosphate Synthetase: Mapping Intra- and Inter-Subunit Conformational Changes

Por Johnson, Jason L., West, Joseph K., Nelson, Andrew D. L., Reinhart, Gregory D.
Publicado em 2007

A tutorial of diverse genome analysis tools found in the CoGe web-platform using Plasmodium spp. as a model

Por Castillo, Andreina I, Nelson, Andrew D L, Haug-Baltzell, Asher K, Lyons, Eric
Publicado no Database (Oxford) (2018)

EPIC-CoGe: managing and analyzing genomic data

Por Nelson, Andrew D L, Haug-Baltzell, Asher K, Davey, Sean, Gregory, Brian D, Lyons, Eric
Publicado no Bioinformatics (2018)

An alternative telomerase RNA in Arabidopsis modulates enzyme activity in response to DNA damage

Por Cifuentes-Rojas, Catherine, Nelson, Andrew D.L., Boltz, Kara A., Kannan, Kalpana, She, Xintao, Shippen, Dorothy E.
Publicado em 2012

Recent emergence and extinction of the Protection of Telomeres 1c gene in Arabidopsis thaliana

Por Kobayashi, Callie R., Castillo-González, Claudia, Survotseva, Yulia, Canal, Elijah, Nelson, Andrew D. L., Shippen, Dorothy E.
Publicado no Plant Cell Rep (2019)

Evolinc: A Tool for the Identification and Evolutionary Comparison of Long Intergenic Non-coding RNAs

Por Nelson, Andrew D. L., Devisetty, Upendra K., Palos, Kyle, Haug-Baltzell, Asher K., Lyons, Eric, Beilstein, Mark A.
Publicado no Front Genet (2017)

Identification and Characterization of the Heat-Induced Plastidial Stress Granules Reveal New Insight Into Arabidopsis Stress Response

Por Chodasiewicz, Monika, Sokolowska, Ewelina Maria, Nelson-Dittrich, Anna C., Masiuk, Aleksandra, Beltran, Juan Camilo Moreno, Nelson, Andrew D. L., Skirycz, Aleksandra
Publicado no Front Plant Sci (2020)

Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

Por Nelson, Andrew D. L., Ponciano, Grisel, McMahan, Colleen, Ilut, Daniel C., Pugh, N. Ace, Elshikha, Diaa Eldin, Hunsaker, Douglas J., Pauli, Duke
Publicado no BMC Plant Biol (2019)

N(6)‐methyladenosine and RNA secondary structure affect transcript stability and protein abundance during systemic salt stress in Arabidopsis

Por Kramer, Marianne C., Janssen, Kevin A., Palos, Kyle, Nelson, Andrew D. L., Vandivier, Lee E., Garcia, Benjamin A., Lyons, Eric, Beilstein, Mark A., Gregory, Brian D.
Publicado no Plant Direct (2020)

A Genomic Analysis of Factors Driving lincRNA Diversification: Lessons from Plants

Por Nelson, Andrew D. L., Forsythe, Evan S., Devisetty, Upendra K., Clausen, David S., Haug-Batzell, Asher K., Meldrum, Ari M. R., Frank, Michael R., Lyons, Eric, Beilstein, Mark A.
Publicado no G3 (Bethesda) (2016)

Global Analysis of the RNA-Protein Interaction and RNA Secondary Structure Landscapes of the Arabidopsis Nucleus

Por Gosai, Sager J., Foley, Shawn W., Wang, Dongxue, Silverman, Ian M., Selamoglu, Nur, Nelson, Andrew D.L., Beilstein, Mark A., Daldal, Fevzi, Deal, Roger B., Gregory, Brian D.
Publicado no Mol Cell (2014)

Single-Cell Telomere-Length Quantification Couples Telomere Length to Meristem Activity and Stem Cell Development in Arabidopsis

Por González-García, Mary-Paz, Pavelescu, Irina, Canela, Andrés, Sevillano, Xavier, Leehy, Katherine A., Nelson, Andrew D.L., Ibañes, Marta, Shippen, Dorothy E., Blasco, Maria A., Caño-Delgado, Ana I.
Publicado no Cell Rep (2015)

Read Mapping and Transcript Assembly: A Scalable and High-Throughput Workflow for the Processing and Analysis of Ribonucleic Acid Sequencing Data

Por Peri, Sateesh, Roberts, Sarah, Kreko, Isabella R., McHan, Lauren B., Naron, Alexandra, Ram, Archana, Murphy, Rebecca L., Lyons, Eric, Gregory, Brian D., Devisetty, Upendra K., Nelson, Andrew D. L.
Publicado no Front Genet (2020)

A Chemical Biology Approach to Model Pontocerebellar Hypoplasia Type 1B (PCH1B)

Por François-Moutal, Liberty, Jahanbakhsh, Shahriyar, Nelson, Andrew D. L., Ray, Debashish, Scott, David D., Hennefarth, Matthew R., Moutal, Aubin, Perez-Miller, Samantha, Ambrose, Andrew J., Al-Shamari, Ahmed, Coursodon, Philippe, Meechoovet, Bessie, Reiman, Rebecca, Lyons, Eric, Beilstein, Mark, Chapman, Eli, Morris, Quaid D., Van Keuren-Jensen, Kendall, Hughes, Timothy R., Khanna, Rajesh, Koehler, Carla, Jen, Joanna, Gokhale, Vijay, Khanna, May
Publicado no ACS Chem Biol (2018)