Natural variations of cold tolerance and temperature acclimation in Caenorhabditis elegans

door Okahata, Misaki, Ohta, Akane, Mizutani, Hitomi, Minakuchi, Yohei, Toyoda, Atsushi, Kuhara, Atsushi
Gepubliceerd in J Comp Physiol B (2016)

Mining of the Uncharacterized Cytochrome P450 Genes Involved in Alkaloid Biosynthesis in California Poppy Using a Draft Genome Sequence

door Hori, Kentaro, Yamada, Yasuyuki, Purwanto, Ratmoyo, Minakuchi, Yohei, Toyoda, Atsushi, Hirakawa, Hideki, Sato, Fumihiko
Gepubliceerd in Plant Cell Physiol (2018)

Endoribonuclease ENDU-2 regulates multiple traits including cold tolerance via cell autonomous and nonautonomous controls in Caenorhabditis elegans

door Ujisawa, Tomoyo, Ohta, Akane, Ii, Tatsuya, Minakuchi, Yohei, Toyoda, Atsushi, Ii, Miki, Kuhara, Atsushi
Gepubliceerd in Proc Natl Acad Sci U S A (2018)

Reduction in chromosome mobility accompanies nuclear organization during early embryogenesis in Caenorhabditis elegans

door Arai, Ritsuko, Sugawara, Takeshi, Sato, Yuko, Minakuchi, Yohei, Toyoda, Atsushi, Nabeshima, Kentaro, Kimura, Hiroshi, Kimura, Akatsuki
Gepubliceerd in Sci Rep (2017)

The mechanoreceptor DEG‐1 regulates cold tolerance in Caenorhabditis elegans

door Takagaki, Natsune, Ohta, Akane, Ohnishi, Kohei, Kawanabe, Akira, Minakuchi, Yohei, Toyoda, Atsushi, Fujiwara, Yuichiro, Kuhara, Atsushi
Gepubliceerd in EMBO Rep (2020)

Multiple Independent Changes in Mitochondrial Genome Conformation in Chlamydomonadalean Algae

door Hamaji, Takashi, Kawai-Toyooka, Hiroko, Toyoda, Atsushi, Minakuchi, Yohei, Suzuki, Masahiro, Fujiyama, Asao, Nozaki, Hisayoshi, Smith, David Roy
Gepubliceerd in Genome Biol Evol (2017)

Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice

door Uchimura, Arikuni, Higuchi, Mayumi, Minakuchi, Yohei, Ohno, Mizuki, Toyoda, Atsushi, Fujiyama, Asao, Miura, Ikuo, Wakana, Shigeharu, Nishino, Jo, Yagi, Takeshi
Gepubliceerd in Genome Res (2015)

Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions

door Kajitani, Rei, Yoshimura, Dai, Okuno, Miki, Minakuchi, Yohei, Kagoshima, Hiroshi, Fujiyama, Asao, Kubokawa, Kaoru, Kohara, Yuji, Toyoda, Atsushi, Itoh, Takehiko
Gepubliceerd in Nat Commun (2019)

Exploring the Limits and Causes of Plastid Genome Expansion in Volvocine Green Algae

door Gaouda, Hager, Hamaji, Takashi, Yamamoto, Kayoko, Kawai-Toyooka, Hiroko, Suzuki, Masahiro, Noguchi, Hideki, Minakuchi, Yohei, Toyoda, Atsushi, Fujiyama, Asao, Nozaki, Hisayoshi, Smith, David Roy
Gepubliceerd in Genome Biol Evol (2018)

Anisogamy evolved with a reduced sex-determining region in volvocine green algae

door Hamaji, Takashi, Kawai-Toyooka, Hiroko, Uchimura, Haruka, Suzuki, Masahiro, Noguchi, Hideki, Minakuchi, Yohei, Toyoda, Atsushi, Fujiyama, Asao, Miyagishima, Shin-ya, Umen, James G., Nozaki, Hisayoshi
Gepubliceerd in Commun Biol (2018)

Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria

door Zheng, Yu, Saitou, Ayana, Wang, Chiung-Mei, Toyoda, Atsushi, Minakuchi, Yohei, Sekiguchi, Yuji, Ueda, Kenji, Takano, Hideaki, Sakai, Yasuteru, Abe, Keietsu, Yokota, Akira, Yabe, Shuhei
Gepubliceerd in Front Microbiol (2019)

Characteristics of induced mutations in offspring derived from irradiated mouse spermatogonia and mature oocytes

door Satoh, Yasunari, Asakawa, Jun-ichi, Nishimura, Mayumi, Kuo, Tony, Shinkai, Norio, Cullings, Harry M., Minakuchi, Yohei, Sese, Jun, Toyoda, Atsushi, Shimada, Yoshiya, Nakamura, Nori, Uchimura, Arikuni
Gepubliceerd in Sci Rep (2020)

Three genomes in the algal genus Volvox reveal the fate of a haploid sex-determining region after a transition to homothallism

door Yamamoto, Kayoko, Hamaji, Takashi, Kawai-Toyooka, Hiroko, Matsuzaki, Ryo, Takahashi, Fumio, Nishimura, Yoshiki, Kawachi, Masanobu, Noguchi, Hideki, Minakuchi, Yohei, Umen, James G., Toyoda, Atsushi, Nozaki, Hisayoshi
Gepubliceerd in Proc Natl Acad Sci U S A (2021)

Genomic and Phenotypic Characterization of a Wild Medaka Population: Towards the Establishment of an Isogenic Population Genetic Resource in Fish

door Spivakov, Mikhail, Auer, Thomas O., Peravali, Ravindra, Dunham, Ian, Dolle, Dirk, Fujiyama, Asao, Toyoda, Atsushi, Aizu, Tomoyuki, Minakuchi, Yohei, Loosli, Felix, Naruse, Kiyoshi, Birney, Ewan, Wittbrodt, Joachim
Gepubliceerd in 2014

Comparative genomic analyses illuminate the distinct evolution of megabats within Chiroptera

door Nikaido, Masato, Kondo, Shinji, Zhang, Zicong, Wu, Jiaqi, Nishihara, Hidenori, Niimura, Yoshihito, Suzuki, Shunta, Touhara, Kazushige, Suzuki, Yutaka, Noguchi, Hideki, Minakuchi, Yohei, Toyoda, Atsushi, Fujiyama, Asao, Sugano, Sumio, Yoneda, Misako, Kai, Chieko
Gepubliceerd in DNA Res (2020)

Comparison of Genomic and Epigenomic Expression in Monozygotic Twins Discordant for Rett Syndrome

door Kunio, Miyake, Yang, Chunshu, Minakuchi, Yohei, Ohori, Kenta, Soutome, Masaki, Hirasawa, Takae, Kazuki, Yasuhiro, Adachi, Noboru, Suzuki, Seiko, Itoh, Masayuki, Goto, Yu-ichi, Andoh, Tomoko, Kurosawa, Hiroshi, Akamatsu, Wado, Ohyama, Manabu, Okano, Hideyuki, Oshimura, Mitsuo, Sasaki, Masayuki, Toyoda, Atsushi, Kubota, Takeo
Gepubliceerd in 2013

Repeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetles

door Ando, Toshiya, Matsuda, Takeshi, Goto, Kumiko, Hara, Kimiko, Ito, Akinori, Hirata, Junya, Yatomi, Joichiro, Kajitani, Rei, Okuno, Miki, Yamaguchi, Katsushi, Kobayashi, Masaaki, Takano, Tomoyuki, Minakuchi, Yohei, Seki, Masahide, Suzuki, Yutaka, Yano, Kentaro, Itoh, Takehiko, Shigenobu, Shuji, Toyoda, Atsushi, Niimi, Teruyuki
Gepubliceerd in Nat Commun (2018)

The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity

door Hanschen, Erik R., Marriage, Tara N., Ferris, Patrick J., Hamaji, Takashi, Toyoda, Atsushi, Fujiyama, Asao, Neme, Rafik, Noguchi, Hideki, Minakuchi, Yohei, Suzuki, Masahiro, Kawai-Toyooka, Hiroko, Smith, David R., Sparks, Halle, Anderson, Jaden, Bakarić, Robert, Luria, Victor, Karger, Amir, Kirschner, Marc W., Durand, Pierre M., Michod, Richard E., Nozaki, Hisayoshi, Olson, Bradley J. S. C.
Gepubliceerd in Nat Commun (2016)

Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein

door Hashimoto, Takuma, Horikawa, Daiki D., Saito, Yuki, Kuwahara, Hirokazu, Kozuka-Hata, Hiroko, Shin-I, Tadasu, Minakuchi, Yohei, Ohishi, Kazuko, Motoyama, Ayuko, Aizu, Tomoyuki, Enomoto, Atsushi, Kondo, Koyuki, Tanaka, Sae, Hara, Yuichiro, Koshikawa, Shigeyuki, Sagara, Hiroshi, Miura, Toru, Yokobori, Shin-ichi, Miyagawa, Kiyoshi, Suzuki, Yutaka, Kubo, Takeo, Oyama, Masaaki, Kohara, Yuji, Fujiyama, Asao, Arakawa, Kazuharu, Katayama, Toshiaki, Toyoda, Atsushi, Kunieda, Takekazu
Gepubliceerd in Nat Commun (2016)

Sequence Analysis of the Genome of an Oil-Bearing Tree, Jatropha curcas L.

door Sato, Shusei, Hirakawa, Hideki, Isobe, Sachiko, Fukai, Eigo, Watanabe, Akiko, Kato, Midori, Kawashima, Kumiko, Minami, Chiharu, Muraki, Akiko, Nakazaki, Naomi, Takahashi, Chika, Nakayama, Shinobu, Kishida, Yoshie, Kohara, Mitsuyo, Yamada, Manabu, Tsuruoka, Hisano, Sasamoto, Shigemi, Tabata, Satoshi, Aizu, Tomoyuki, Toyoda, Atsushi, Shin-i, Tadasu, Minakuchi, Yohei, Kohara, Yuji, Fujiyama, Asao, Tsuchimoto, Suguru, Kajiyama, Shin'ichiro, Makigano, Eri, Ohmido, Nobuko, Shibagaki, Nakako, Cartagena, Joyce A., Wada, Naoki, Kohinata, Tsutomu, Atefeh, Alipour, Yuasa, Shota, Matsunaga, Sachihiro, Fukui, Kiichi
Gepubliceerd in 2011