Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions

по Levitsky, Victor G, Ignatieva, Elena V, Ananko, Elena A, Turnaev, Igor I, Merkulova, Tatyana I, Kolchanov, Nikolay A, Hodgman, TC
Опубликовано 2007

Ortho-Aminoazotoluene activates mouse Constitutive Androstane Receptor (mCAR) and increases expression of mCAR target genes

по Smetanina, Mariya A., Pakharukova, Mariya Y., Kurinna, Svitlana M., Dong, Bingning, Hernandez, Juan P., Moore, David D., Merkulova, Tatyana I.
Опубликовано 2011

Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data

по Levitsky, Victor G, Kulakovskiy, Ivan V, Ershov, Nikita I, Oshchepkov, Dmitry Yu, Makeev, Vsevolod J, Hodgman, T C, Merkulova, Tatyana I
Опубликовано в: BMC Genomics (2014)

Detection of Regulatory SNPs in Human Genome Using ChIP-seq ENCODE Data

по Bryzgalov, Leonid O., Antontseva, Elena V., Matveeva, Marina Yu., Shilov, Alexander G., Kashina, Elena V., Mordvinov, Viatcheslav A., Merkulova, Tatyana I.
Опубликовано 2013

rSNP_Guide, a database system for analysis of transcription factor binding to DNA with variations: application to genome annotation

по Ponomarenko, Julia V., Merkulova, Tatyana I., Orlova, Galina V., Fokin, Oleg N., Gorshkova, Elena V., Frolov, Anatoly S., Valuev, Vadim P., Ponomarenko, Mikhail P.
Опубликовано 2003

rSNP_Guide, a database system for analysis of transcription factor binding to target sequences: application to SNPs and site-directed mutations

по Ponomarenko, Julia V., Merkulova, Tatyana I., Vasiliev, Gennady V., Levashova, Zoya B., Orlova, Galina V., Lavryushev, Sergey V., Fokin, Oleg N., Ponomarenko, Mikhail P., Frolov, Anatoly S., Sarai, Akinori
Опубликовано 2001