Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions

Por Levitsky, Victor G, Ignatieva, Elena V, Ananko, Elena A, Turnaev, Igor I, Merkulova, Tatyana I, Kolchanov, Nikolay A, Hodgman, TC
Publicado em 2007

Ortho-Aminoazotoluene activates mouse Constitutive Androstane Receptor (mCAR) and increases expression of mCAR target genes

Por Smetanina, Mariya A., Pakharukova, Mariya Y., Kurinna, Svitlana M., Dong, Bingning, Hernandez, Juan P., Moore, David D., Merkulova, Tatyana I.
Publicado em 2011

Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data

Por Levitsky, Victor G, Kulakovskiy, Ivan V, Ershov, Nikita I, Oshchepkov, Dmitry Yu, Makeev, Vsevolod J, Hodgman, T C, Merkulova, Tatyana I
Publicado no BMC Genomics (2014)

Detection of Regulatory SNPs in Human Genome Using ChIP-seq ENCODE Data

Por Bryzgalov, Leonid O., Antontseva, Elena V., Matveeva, Marina Yu., Shilov, Alexander G., Kashina, Elena V., Mordvinov, Viatcheslav A., Merkulova, Tatyana I.
Publicado em 2013

rSNP_Guide, a database system for analysis of transcription factor binding to DNA with variations: application to genome annotation

Por Ponomarenko, Julia V., Merkulova, Tatyana I., Orlova, Galina V., Fokin, Oleg N., Gorshkova, Elena V., Frolov, Anatoly S., Valuev, Vadim P., Ponomarenko, Mikhail P.
Publicado em 2003

rSNP_Guide, a database system for analysis of transcription factor binding to target sequences: application to SNPs and site-directed mutations

Por Ponomarenko, Julia V., Merkulova, Tatyana I., Vasiliev, Gennady V., Levashova, Zoya B., Orlova, Galina V., Lavryushev, Sergey V., Fokin, Oleg N., Ponomarenko, Mikhail P., Frolov, Anatoly S., Sarai, Akinori
Publicado em 2001