YeATSAM analysis of the walnut and chickpea transcriptome reveals key genes undetected by current annotation tools

Tekijä Chakraborty, Sandeep, Martínez-García, Pedro J., Dandekar, Abhaya M.
Julkaisussa F1000Res (2016)

Heterogeneity in the entire genome for three genotypes of peach [Prunus persica (L.) Batsch] as distinguished from sequence analysis of genomic variants

Tekijä Fresnedo-Ramírez, Jonathan, Martínez-García, Pedro J, Parfitt, Dan E, Crisosto, Carlos H, Gradziel, Thomas M
Julkaistu 2013

DNA Methylation Analysis of Dormancy Release in Almond (Prunus dulcis) Flower Buds Using Epi-Genotyping by Sequencing

Tekijä Prudencio, Ángela S., Werner, Olaf, Martínez-García, Pedro J., Dicenta, Federico, Ros, Rosa M., Martínez-Gómez, Pedro
Julkaisussa Int J Mol Sci (2018)

Gene Expression Analysis of Induced Plum pox virus (Sharka) Resistance in Peach (Prunus persica) by Almond (P. dulcis) Grafting

Tekijä Rubio, Manuel, Martínez-García, Pedro J., Nikbakht-Dehkordi, Azam, Prudencio, Ángela S., Gómez, Eva M., Rodamilans, Bernardo, Dicenta, Federico, García, Juan A., Martínez-Gómez, Pedro
Julkaisussa Int J Mol Sci (2021)

Application of Genomic and Quantitative Genetic Tools to Identify Candidate Resistance Genes for Brown Rot Resistance in Peach

Tekijä Martínez-García, Pedro J., Parfitt, Dan E., Bostock, Richard M., Fresnedo-Ramírez, Jonathan, Vazquez-Lobo, Alejandra, Ogundiwin, Ebenezer A., Gradziel, Thomas M., Crisosto, Carlos H.
Julkaistu 2013

Whole genome sequencing of peach (<it>Prunus persica </it>L.) for SNP identification and selection

Tekijä Ahmad Riaz, Parfitt Dan E, Fass Joseph, Ogundiwin Ebenezer, Dhingra Amit, Gradziel Thomas M, Lin Dawei, Joshi Nikhil A, Martinez-Garcia Pedro J, Crisosto Carlos H
Julkaistu 2011-11-01

Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection

Tekijä Ahmad, Riaz, Parfitt, Dan E, Fass, Joseph, Ogundiwin, Ebenezer, Dhingra, Amit, Gradziel, Thomas M, Lin, Dawei, Joshi, Nikhil A, Martinez-Garcia, Pedro J, Crisosto, Carlos H
Julkaistu 2011

Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana)

Tekijä Gonzalez-Ibeas, Daniel, Martinez-Garcia, Pedro J., Famula, Randi A., Delfino-Mix, Annette, Stevens, Kristian A., Loopstra, Carol A., Langley, Charles H., Neale, David B., Wegrzyn, Jill L.
Julkaisussa G3 (Bethesda) (2016)

A new genomic tool for walnut (Juglans regia L.): development and validation of the high‐density Axiom™ J. regia 700K SNP genotyping array

Tekijä Marrano, Annarita, Martínez‐García, Pedro J., Bianco, Luca, Sideli, Gina M., Di Pierro, Erica A., Leslie, Charles A., Stevens, Kristian A., Crepeau, Marc W., Troggio, Michela, Langley, Charles H., Neale, David B.
Julkaisussa Plant Biotechnol J (2018)

A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda

Tekijä Westbrook, Jared W., Chhatre, Vikram E., Wu, Le-Shin, Chamala, Srikar, Neves, Leandro Gomide, Muñoz, Patricio, Martínez-García, Pedro J., Neale, David B., Kirst, Matias, Mockaitis, Keithanne, Nelson, C. Dana, Peter, Gary F., Davis, John M., Echt, Craig S.
Julkaisussa G3 (Bethesda) (2015)

Genomic Variation Among and Within Six Juglans Species

Tekijä Stevens, Kristian A., Woeste, Keith, Chakraborty, Sandeep, Crepeau, Marc W., Leslie, Charles A., Martínez-García, Pedro J., Puiu, Daniela, Romero-Severson, Jeanne, Coggeshall, Mark, Dandekar, Abhaya M., Kluepfel, Daniel, Neale, David B., Salzberg, Steven L., Langley, Charles H.
Julkaisussa G3 (Bethesda) (2018)

Insights into the Loblolly Pine Genome: Characterization of BAC and Fosmid Sequences

Tekijä Wegrzyn, Jill L., Lin, Brian Y., Zieve, Jacob J., Dougherty, William M., Martínez-García, Pedro J., Koriabine, Maxim, Holtz-Morris, Ann, deJong, Pieter, Crepeau, Marc, Langley, Charles H., Puiu, Daniela, Salzberg, Steven L., Neale, David B., Stevens, Kristian A.
Julkaistu 2013

Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization

Tekijä Montanari, Sara, Bianco, Luca, Allen, Brian J., Martínez-García, Pedro J., Bassil, Nahla V., Postman, Joseph, Knäbel, Mareike, Kitson, Biff, Deng, Cecilia H., Chagné, David, Crepeau, Marc W., Langley, Charles H., Evans, Kate, Dhingra, Amit, Troggio, Michela, Neale, David B.
Julkaisussa BMC Genomics (2019)

Pedigree analysis of 220 almond genotypes reveals two world mainstream breeding lines based on only three different cultivars

Tekijä Pérez de los Cobos, Felipe, Martínez-García, Pedro J., Romero, Agustí, Miarnau, Xavier, Eduardo, Iban, Howad, Werner, Mnejja, Mourad, Dicenta, Federico, Socias i Company, Rafel, Rubio-Cabetas, Maria J., Gradziel, Thomas M., Wirthensohn, Michelle, Duval, Henri, Holland, Doron, Arús, Pere, Vargas, Francisco J., Batlle, Ignasi
Julkaisussa Hortic Res (2021)

Sequence of the Sugar Pine Megagenome

Tekijä Stevens, Kristian A., Wegrzyn, Jill L., Zimin, Aleksey, Puiu, Daniela, Crepeau, Marc, Cardeno, Charis, Paul, Robin, Gonzalez-Ibeas, Daniel, Koriabine, Maxim, Holtz-Morris, Ann E., Martínez-García, Pedro J., Sezen, Uzay U., Marçais, Guillaume, Jermstad, Kathy, McGuire, Patrick E., Loopstra, Carol A., Davis, John M., Eckert, Andrew, de Jong, Pieter, Yorke, James A., Salzberg, Steven L., Neale, David B., Langley, Charles H.
Julkaisussa Genetics (2016)

Unique Features of the Loblolly Pine (Pinus taeda L.) Megagenome Revealed Through Sequence Annotation

Tekijä Wegrzyn, Jill L., Liechty, John D., Stevens, Kristian A., Wu, Le-Shin, Loopstra, Carol A., Vasquez-Gross, Hans A., Dougherty, William M., Lin, Brian Y., Zieve, Jacob J., Martínez-García, Pedro J., Holt, Carson, Yandell, Mark, Zimin, Aleksey V., Yorke, James A., Crepeau, Marc W., Puiu, Daniela, Salzberg, Steven L., de Jong, Pieter J., Mockaitis, Keithanne, Main, Doreen, Langley, Charles H., Neale, David B.
Julkaistu 2014

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

Tekijä Neale, David B, Wegrzyn, Jill L, Stevens, Kristian A, Zimin, Aleksey V, Puiu, Daniela, Crepeau, Marc W, Cardeno, Charis, Koriabine, Maxim, Holtz-Morris, Ann E, Liechty, John D, Martínez-García, Pedro J, Vasquez-Gross, Hans A, Lin, Brian Y, Zieve, Jacob J, Dougherty, William M, Fuentes-Soriano, Sara, Wu, Le-Shin, Gilbert, Don, Marçais, Guillaume, Roberts, Michael, Holt, Carson, Yandell, Mark, Davis, John M, Smith, Katherine E, Dean, Jeffrey FD, Lorenz, W Walter, Whetten, Ross W, Sederoff, Ronald, Wheeler, Nicholas, McGuire, Patrick E, Main, Doreen, Loopstra, Carol A, Mockaitis, Keithanne, deJong, Pieter J, Yorke, James A, Salzberg, Steven L, Langley, Charles H
Julkaistu 2014