Decomposition of Gene Expression State Space Trajectories

Por Mar, Jessica C., Quackenbush, John
Publicado em 2009

Inferring steady state single-cell gene expression distributions from analysis of mesoscopic samples

Por Mar, Jessica C, Rubio, Renee, Quackenbush, John
Publicado em 2006

Defining an informativeness metric for clustering gene expression data

Por Mar, Jessica C., Wells, Christine A., Quackenbush, John
Publicado em 2011

Bayesian and maximum likelihood phylogenetic analyses of protein sequence data under relative branch-length differences and model violation

Por Mar, Jessica C, Harlow, Timothy J, Ragan, Mark A
Publicado em 2005

Single-cell transcriptogenomics reveals transcriptional exclusion of ENU-mutated alleles

Por Li, Wenge, Calder, R. Brent, Mar, Jessica C., Vijg, Jan
Publicado no Mutat Res (2015)

attract: A Method for Identifying Core Pathways That Define Cellular Phenotypes

Por Mar, Jessica C., Matigian, Nicholas A., Quackenbush, John, Wells, Christine A.
Publicado em 2011

Single-Cell Gene Expression Profiles Define Self-Renewing, Pluripotent, and Lineage Primed States of Human Pluripotent Stem Cells

Por Hough, Shelley R., Thornton, Matthew, Mason, Elizabeth, Mar, Jessica C., Wells, Christine A., Pera, Martin F.
Publicado em 2014

Variability of Gene Expression Identifies Transcriptional Regulators of Early Human Embryonic Development

Por Hasegawa, Yu, Taylor, Deanne, Ovchinnikov, Dmitry A., Wolvetang, Ernst J., de Torrenté, Laurence, Mar, Jessica C.
Publicado no PLoS Genet (2015)

Data-driven normalization strategies for high-throughput quantitative RT-PCR

Por Suzuki Harukazu, Hayashizaki Yoshihide, Irvine Katharine M, Schroder Kate, Kimura Yasumasa, Mar Jessica C, Hume David, Quackenbush John
Publicado em 2009-04-01

Data-driven normalization strategies for high-throughput quantitative RT-PCR

Por Mar, Jessica C, Kimura, Yasumasa, Schroder, Kate, Irvine, Katharine M, Hayashizaki, Yoshihide, Suzuki, Harukazu, Hume, David, Quackenbush, John
Publicado em 2009

Induced Pluripotent Stem Cells from Ataxia-Telangiectasia Recapitulate the Cellular Phenotype

Por Nayler, Sam, Gatei, Magtouf, Kozlov, Sergei, Gatti, Richard, Mar, Jessica C., Wells, Christine A., Lavin, Martin, Wolvetang, Ernst
Publicado em 2012

Gene Expression Variability as a Unifying Element of the Pluripotency Network

Por Mason, Elizabeth A., Mar, Jessica C., Laslett, Andrew L., Pera, Martin F., Quackenbush, John, Wolvetang, Ernst, Wells, Christine A.
Publicado em 2014

The meta-epigenomic structure of purified human stem cell populations is defined at cis-regulatory sequences

Por Wijetunga, N. Ari, Delahaye, Fabien, Zhao, Yong Mei, Golden, Aaron, Mar, Jessica C., Einstein, Francine H., Greally, John M.
Publicado no Nat Commun (2014)

Temporal dynamics and transcriptional control using single-cell gene expression analysis

Por Kouno, Tsukasa, de Hoon, Michiel, Mar, Jessica C, Tomaru, Yasuhiro, Kawano, Mitsuoki, Carninci, Piero, Suzuki, Harukazu, Hayashizaki, Yoshihide, Shin, Jay W
Publicado em 2013

Epstein–Barr virus nuclear antigen 3C regulated genes in lymphoblastoid cell lines

Por Zhao, Bo, Mar, Jessica C., Maruo, Seiji, Lee, Sungwook, Gewurz, Benjamin E., Johannsen, Eric, Holton, Kristina, Rubio, Renee, Takada, Kenzo, Quackenbush, John, Kieff, Elliott
Publicado em 2011

Canonical NF-κB Activation Is Essential for Epstein-Barr Virus Latent Membrane Protein 1 TES2/CTAR2 Gene Regulation

Por Gewurz, Benjamin E., Mar, Jessica C., Padi, Megha, Zhao, Bo, Shinners, Nicholas P., Takasaki, Kaoru, Bedoya, Edward, Zou, James Y., Cahir-Mcfarland, Ellen, Quackenbush, John, Kieff, Elliott
Publicado em 2011

Variance of Gene Expression Identifies Altered Network Constraints in Neurological Disease

Por Mar, Jessica C., Matigian, Nicholas A., Mackay-Sim, Alan, Mellick, George D., Sue, Carolyn M., Silburn, Peter A., McGrath, John J., Quackenbush, John, Wells, Christine A.
Publicado em 2011

Genome-wide siRNA screen for mediators of NF-κB activation

Por Gewurz, Benjamin E., Towfic, Fadi, Mar, Jessica C., Shinners, Nicholas P., Takasaki, Kaoru, Zhao, Bo, Cahir-McFarland, Ellen D., Quackenbush, John, Xavier, Ramnik J., Kieff, Elliott
Publicado em 2012

Arteriolar niches maintain haematopoietic stem cell quiescence

Por Kunisaki, Yuya, Bruns, Ingmar, Scheiermann, Christoph, Ahmed, Jalal, Pinho, Sandra, Zhang, Dachuan, Mizoguchi, Toshihide, Wei, Qiaozhi, Lucas, Daniel, Ito, Keisuke, Mar, Jessica C., Bergman, Aviv, Frenette, Paul S.
Publicado em 2013

Application of Gene Expression Trajectories Initiated from ErbB Receptor Activation Highlights the Dynamics of Divergent Promoter Usage

Por Carbajo, Daniel, Magi, Shigeyuki, Itoh, Masayoshi, Kawaji, Hideya, Lassmann, Timo, Arner, Erik, Forrest, Alistair R. R., Carninci, Piero, Hayashizaki, Yoshihide, Daub, Carsten O., Okada-Hatakeyama, Mariko, Mar, Jessica C.
Publicado no PLoS One (2015)