Whole genome evaluation of horizontal transfers in the pathogenic fungus Aspergillus fumigatus

מאת Mallet, Ludovic V, Becq, Jennifer, Deschavanne, Patrick
יצא לאור 2010

Computational Identification of Novel Genes: Current and Future Perspectives

מאת Klasberg, Steffen, Bitard-Feildel, Tristan, Mallet, Ludovic
הוצא לאור ב Bioinform Biol Insights (2016)

PhylOligo: a package to identify contaminant or untargeted organism sequences in genome assemblies

מאת Mallet, Ludovic, Bitard-Feildel, Tristan, Cerutti, Franck, Chiapello, Hélène
הוצא לאור ב Bioinformatics (2017)

GOHTAM: a website for ‘Genomic Origin of Horizontal Transfers, Alignment and Metagenomics’

מאת Ménigaud, Sabine, Mallet, Ludovic, Picord, Géraldine, Churlaud, Cécile, Borrel, Alexandre, Deschavanne, Patrick
יצא לאור 2012

Analysis of COMPASS, a New Comprehensive Plasmid Database Revealed Prevalence of Multireplicon and Extensive Diversity of IncF Plasmids

מאת Douarre, Pierre-Emmanuel, Mallet, Ludovic, Radomski, Nicolas, Felten, Arnaud, Mistou, Michel-Yves
הוצא לאור ב Front Microbiol (2020)

Dynamics of mobile genetic elements of Listeria monocytogenes persisting in ready-to-eat seafood processing plants in France

מאת Palma, Federica, Brauge, Thomas, Radomski, Nicolas, Mallet, Ludovic, Felten, Arnaud, Mistou, Michel-Yves, Brisabois, Anne, Guillier, Laurent, Midelet-Bourdin, Graziella
הוצא לאור ב BMC Genomics (2020)

Horizontal acquisition of a hypoxia-responsive molybdenum cofactor biosynthesis pathway contributed to Mycobacterium tuberculosis pathoadaptation

מאת Levillain, Florence, Poquet, Yannick, Mallet, Ludovic, Mazères, Serge, Marceau, Michael, Brosch, Roland, Bange, Franz-Christoph, Supply, Philip, Magalon, Axel, Neyrolles, Olivier
הוצא לאור ב PLoS Pathog (2017)

Unraveling the evolution and coevolution of small regulatory RNAs and coding genes in Listeria

מאת Cerutti, Franck, Mallet, Ludovic, Painset, Anaïs, Hoede, Claire, Moisan, Annick, Bécavin, Christophe, Duval, Mélodie, Dussurget, Olivier, Cossart, Pascale, Gaspin, Christine, Chiapello, Hélène
הוצא לאור ב BMC Genomics (2017)

A Simple and Robust Statistical Method to Define Genetic Relatedness of Samples Related to Outbreaks at the Genomic Scale – Application to Retrospective Salmonella Foodborne Outbre...

מאת Radomski, Nicolas, Cadel-Six, Sabrina, Cherchame, Emeline, Felten, Arnaud, Barbet, Pauline, Palma, Federica, Mallet, Ludovic, Le Hello, Simon, Weill, François-Xavier, Guillier, Laurent, Mistou, Michel-Yves
הוצא לאור ב Front Microbiol (2019)

Deciphering Genome Content and Evolutionary Relationships of Isolates from the Fungus Magnaporthe oryzae Attacking Different Host Plants

מאת Chiapello, Hélène, Mallet, Ludovic, Guérin, Cyprien, Aguileta, Gabriela, Amselem, Joëlle, Kroj, Thomas, Ortega-Abboud, Enrique, Lebrun, Marc-Henri, Henrissat, Bernard, Gendrault, Annie, Rodolphe, François, Tharreau, Didier, Fournier, Elisabeth
הוצא לאור ב Genome Biol Evol (2015)

Comparative phenotypic, genotypic and genomic analyses of Bacillus thuringiensis associated with foodborne outbreaks in France

מאת Bonis, Mathilde, Felten, Arnaud, Pairaud, Sylvie, Dijoux, Angélie, Maladen, Véronique, Mallet, Ludovic, Radomski, Nicolas, Duboisset, Arnaud, Arar, Chantal, Sarda, Xavier, Vial, Gaelle, Mistou, Michel-Yves, Firmesse, Olivier, Hennekinne, Jacques-Antoine, Herbin, Sabine
הוצא לאור ב PLoS One (2021)

Hemimetabolous genomes reveal molecular basis of termite eusociality

מאת Harrison, Mark C., Jongepier, Evelien, Robertson, Hugh M., Arning, Nicolas, Bitard-Feildel, Tristan, Chao, Hsu, Childers, Christopher P., Dinh, Huyen, Doddapaneni, Harshavardhan, Dugan, Shannon, Gowin, Johannes, Greiner, Carolin, Han, Yi, Hu, Haofu, Hughes, Daniel S. T., Huylmans, Ann-Kathrin, Kemena, Carsten, Kremer, Lukas P. M., Lee, Sandra L., Lopez-Ezquerra, Alberto, Mallet, Ludovic, Monroy-Kuhn, Jose M., Moser, Annabell, Murali, Shwetha C., Muzny, Donna M., Otani, Saria, Piulachs, Maria-Dolors, Poelchau, Monica, Qu, Jiaxin, Schaub, Florentine, Wada-Katsumata, Ayako, Worley, Kim C., Xie, Qiaolin, Ylla, Guillem, Poulsen, Michael, Gibbs, Richard A., Schal, Coby, Richards, Stephen, Belles, Xavier, Korb, Judith, Bornberg-Bauer, Erich
הוצא לאור ב Nat Ecol Evol (2018)