Breast Cancer Patient Stratification using a Molecular Regularized Consensus Clustering Method

por Wang, Chao, Machiraju, Raghu, Huang, Kun
Publicado 2014

Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types

por Meng, Nan, Machiraju, Raghu, Huang, Kun
Publicado en BMC Bioinformatics (2016)

Two-Point Correlation as a Feature for Histology Images: Feature Space Structure and Correlation Updating

por Cooper, Lee, Saltz, Joel, Machiraju, Raghu, Huang, Kun
Publicado 2010

iGPSe: A visual analytic system for integrative genomic based cancer patient stratification

por Ding, Hao, Wang, Chao, Huang, Kun, Machiraju, Raghu
Publicado en BMC Bioinformatics (2014)

GRAPHIE: graph based histology image explorer

por Ding, Hao, Wang, Chao, Huang, Kun, Machiraju, Raghu
Publicado en BMC Bioinformatics (2015)

Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews

por Ji, Xiaonan, Machiraju, Raghu, Ritter, Alan, Yen, Po-Yin
Publicado en AMIA Annu Symp Proc (2015)

Integrative cancer patient stratification via subspace merging

por Ding, Hao, Sharpnack, Michael, Wang, Chao, Huang, Kun, Machiraju, Raghu
Publicado en Bioinformatics (2019)

Self-organizing maps with variable neighborhoods facilitate learning of chromatin accessibility signal shapes associated with regulatory elements

por Eicher, Tara, Chan, Jany, Luu, Han, Machiraju, Raghu, Mathé, Ewy A.
Publicado en BMC Bioinformatics (2021)

A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data

por Han, Zhi, Tian, Lu, Pécot, Thierry, Huang, Tim, Machiraju, Raghu, Huang, Kun
Publicado 2012

State–Space Models of Mental Processes from fMRI

por Janoos, Firdaus, Singh, Shantanu, Machiraju, Raghu, Wells, William M., Mórocz, Istvan Á.
Publicado 2011

Predictive Modeling for Pressure Ulcers from Intensive Care Unit Electronic Health Records

por Kaewprag, Pacharmon, Newton, Cheryl, Vermillion, Brenda, Hyun, Sookyung, Huang, Kun, Machiraju, Raghu
Publicado en AMIA Jt Summits Transl Sci Proc (2015)

Predictive models for pressure ulcers from intensive care unit electronic health records using Bayesian networks

por Kaewprag, Pacharmon, Newton, Cheryl, Vermillion, Brenda, Hyun, Sookyung, Huang, Kun, Machiraju, Raghu
Publicado en BMC Med Inform Decis Mak (2017)

annoPeak: a web application to annotate and visualize peaks from ChIP-seq/ChIP-exo-seq

por Tang, Xing, Srivastava, Arunima, Liu, Huayang, Machiraju, Raghu, Huang, Kun, Leone, Gustavo
Publicado en Bioinformatics (2017)

annoPeak: a web application to annotate and visualize peaks from ChIP-seq/ChIP-exo-seq

por Tang, Xing, Srivastava, Arunima, Liu, Huayang, Machiraju, Raghu, Huang, Kun, Leone, Gustavo
Publicado en Bioinformatics (2018)

Imitating Pathologist Based Assessment With Interpretable and Context Based Neural Network Modeling of Histology Images

por Srivastava, Arunima, Kulkarni, Chaitanya, Huang, Kun, Parwani, Anil, Mallick, Parag, Machiraju, Raghu
Publicado en Biomed Inform Insights (2018)

Challenges in proteogenomics: a comparison of analysis methods with the case study of the DREAM proteogenomics sub-challenge

por Eicher, Tara, Patt, Andrew, Kautto, Esko, Machiraju, Raghu, Mathé, Ewy, Zhang, Yan
Publicado en BMC Bioinformatics (2019)

Effectively processing medical term queries on the UMLS Metathesaurus by layered dynamic programming

por Ren, Kaiyu, Lai, Albert M, Mukhopadhyay, Aveek, Machiraju, Raghu, Huang, Kun, Xiang, Yang
Publicado 2014

Robust 3D Reconstruction and Identification of Dendritic Spines from Optical Microscopy Imaging

por Janoos, Firdaus, Mosaliganti, Kishore, Xu, Xiaoyin, Machiraju, Raghu, Huang, Kun, Wong, Stephen T.C.
Publicado 2008

Identifying survival associated morphological features of triple negative breast cancer using multiple datasets

por Wang, Chao, Pécot, Thierry, Zynger, Debra L, Machiraju, Raghu, Shapiro, Charles L, Huang, Kun
Publicado 2013

Identifying Nuclear Phenotypes Using Semi-supervised Metric Learning

por Singh, Shantanu, Janoos, Firdaus, Pécot, Thierry, Caserta, Enrico, Leone, Gustavo, Rittscher, Jens, Machiraju, Raghu
Publicado en Inf Process Med Imaging (2011)