Fast and flexible bacterial genomic epidemiology with PopPUNK

Por Lees, John A., Harris, Simon R., Tonkin-Hill, Gerry, Gladstone, Rebecca A., Lo, Stephanie W., Weiser, Jeffrey N., Corander, Jukka, Bentley, Stephen D., Croucher, Nicholas J.
Publicado no Genome Res (2019)

Putative novel cps loci in a large global collection of pneumococci

Por van Tonder, Andries J., Gladstone, Rebecca A., Lo, Stephanie W., Nahm, Moon H., du Plessis, Mignon, Cornick, Jennifer, Kwambana-Adams, Brenda, Madhi, Shabir A., Hawkins, Paulina A., Benisty, Rachel, Dagan, Ron, Everett, Dean, Antonio, Martin, Klugman, Keith P., von Gottberg, Anne, Breiman, Robert F., McGee, Lesley, Bentley, Stephen D.
Publicado no Microb Genom (2019)

Global Distribution of Invasive Serotype 35D Streptococcus pneumoniae Isolates following Introduction of 13-Valent Pneumococcal Conjugate Vaccine

Por Lo, Stephanie W., Gladstone, Rebecca A., van Tonder, Andries J., Hawkins, Paulina A., Kwambana-Adams, Brenda, Cornick, Jennifer E., Madhi, Shabir A., Nzenze, Susan A., du Plessis, Mignon, Kandasamy, Rama, Carter, Philip E., Eser, Özgen Köseoglu, Ho, Pak Leung, Elmdaghri, Naima, Shakoor, Sadia, Clarke, Stuart C., Antonio, Martin, Everett, Dean B., von Gottberg, Anne, Klugman, Keith P., McGee, Lesley, Breiman, Robert F., Bentley, Stephen D.
Publicado no J Clin Microbiol (2018)

International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact

Por Gladstone, Rebecca A., Lo, Stephanie W., Lees, John A., Croucher, Nicholas J., van Tonder, Andries J., Corander, Jukka, Page, Andrew J., Marttinen, Pekka, Bentley, Leon J., Ochoa, Theresa J., Ho, Pak Leung, du Plessis, Mignon, Cornick, Jennifer E., Kwambana-Adams, Brenda, Benisty, Rachel, Nzenze, Susan A., Madhi, Shabir A., Hawkins, Paulina A., Everett, Dean B., Antonio, Martin, Dagan, Ron, Klugman, Keith P., von Gottberg, Anne, McGee, Lesley, Breiman, Robert F., Bentley, Stephen D.
Publicado no EBioMedicine (2019)

A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa

Por Lo, Stephanie W, Gladstone, Rebecca A, van Tonder, Andries J, Du Plessis, Mignon, Cornick, Jennifer E, Hawkins, Paulina A, Madhi, Shabir A, Nzenze, Susan A, Kandasamy, Rama, Ravikumar, K L, Elmdaghri, Naima, Kwambana-Adams, Brenda, Almeida, Samanta Cristine Grassi, Skoczynska, Anna, Egorova, Ekaterina, Titov, Leonid, Saha, Samir K, Paragi, Metka, Everett, Dean B, Antonio, Martin, Klugman, Keith P, Li, Yuan, Metcalf, Benjamin J, Beall, Bernard, McGee, Lesley, Breiman, Robert F, Bentley, Stephen D, von Gottberg, Anne
Publicado no J Antimicrob Chemother (2020)