Electrostatic Properties of Protein-Protein Complexes

por Kundrotas, Petras J., Alexov, Emil
Publicado em 2006

PROTCOM: searchable database of protein complexes enhanced with domain–domain structures

por Kundrotas, Petras J., Alexov, Emil
Publicado em 2007

Modeling of denatured state for calculation of the electrostatic contribution to protein stability

por Kundrotas, Petras J., Karshikoff, Andrey
Publicado em 2002

Predicting residue contacts using pragmatic correlated mutations method: reducing the false positives

por Kundrotas, Petras J, Alexov, Emil G
Publicado em 2006

Accuracy of Protein-Protein Binding Sites in High-Throughput Template-Based Modeling

por Kundrotas, Petras J., Vakser, Ilya A.
Publicado em 2010

Protein–protein alternative binding modes do not overlap

por Kundrotas, Petras J, Vakser, Ilya A
Publicado em 2013

Global and local structural similarity in protein–protein complexes: Implications for template-based docking

por Kundrotas, Petras J., Vakser, Ilya A.
Publicado no Proteins (2013)

Docking by structural similarity at protein-protein interfaces

por Sinha, Rohita, Kundrotas, Petras J., Vakser, Ilya
Publicado em 2010

GWIDD: Genome-wide protein docking database

por Kundrotas, Petras J., Zhu, Zhengwei, Vakser, Ilya A.
Publicado em 2010

Protein Docking by the Interface Structure Similarity: How Much Structure Is Needed?

por Sinha, Rohita, Kundrotas, Petras J., Vakser, Ilya A.
Publicado em 2012

GWIDD: a comprehensive resource for genome-wide structural modeling of protein-protein interactions

por Kundrotas, Petras J, Zhu, Zhengwei, Vakser, Ilya A
Publicado em 2012

Structural templates for modeling homodimers

por Kundrotas, Petras J, Vakser, Ilya A, Janin, Joël
Publicado em 2013

Structural quality of unrefined models in protein docking

por Anishchenko, Ivan, Kundrotas, Petras J., Vakser, Ilya A.
Publicado no Proteins (2016)

Modeling Complexes of Modeled Proteins

por Anishchenko, Ivan, Kundrotas, Petras J., Vakser, Ilya A.
Publicado no Proteins (2016)

Contact Potential for Structure Prediction of Proteins and Protein Complexes from Potts Model

por Anishchenko, Ivan, Kundrotas, Petras J., Vakser, Ilya A.
Publicado no Biophys J (2018)

Computational Feasibility of an Exhaustive Search of Side-Chain Conformations in Protein-Protein Docking

por Dauzhenka, Taras, Kundrotas, Petras J., Vakser, Ilya A.
Publicado no J Comput Chem (2018)

Inhibition of Protein Interactions: Co-Crystalized Protein-Protein Interfaces are Nearly as Good as Holo Proteins in Rigid-Body Ligand Docking

por Belkin, Saveliy, Kundrotas, Petras J., Vakser, Ilya A.
Publicado no J Comput Aided Mol Des (2018)

Text Mining for Protein Docking

por Badal, Varsha D., Kundrotas, Petras J., Vakser, Ilya A.
Publicado no PLoS Comput Biol (2015)

Natural language processing in text mining for structural modeling of protein complexes

por Badal, Varsha D., Kundrotas, Petras J., Vakser, Ilya A.
Publicado no BMC Bioinformatics (2018)

Text mining for modeling of protein complexes enhanced by machine learning

por Badal, Varsha D, Kundrotas, Petras J, Vakser, Ilya A
Publicado no Bioinformatics (2020)