Construction, Characterization, and Preliminary BAC-End Sequence Analysis of a Bacterial Artificial Chromosome Library of the Tea Plant (Camellia sinensis)

Por Lin, Jinke, Kudrna, Dave, Wing, Rod A.
Publicado em 2011

Transposable element distribution, abundance and role in genome size variation in the genus Oryza

Por Zuccolo, Andrea, Sebastian, Aswathy, Talag, Jayson, Yu, Yeisoo, Kim, HyeRan, Collura, Kristi, Kudrna, Dave, Wing, Rod A
Publicado em 2007

Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences

Por Zhang, Jianwei, Kudrna, Dave, Mu, Ting, Li, Weiming, Copetti, Dario, Yu, Yeisoo, Goicoechea, Jose Luis, Lei, Yang, Wing, Rod A.
Publicado no Bioinformatics (2016)

DNA methylation changes facilitated evolution of genes derived from Mutator-like transposable elements

Por Wang, Jun, Yu, Yeisoo, Tao, Feng, Zhang, Jianwei, Copetti, Dario, Kudrna, Dave, Talag, Jayson, Lee, Seunghee, Wing, Rod A., Fan, Chuanzhu
Publicado no Genome Biol (2016)

A BAC library of the SP80-3280 sugarcane variety (saccharum sp.) and its inferred microsynteny with the sorghum genome

Por Figueira, Thais Rezende e Silva, Okura, Vagner, Rodrigues da Silva, Felipe, Jose da Silva, Marcio, Kudrna, Dave, Ammiraju, Jetty SS, Talag, Jayson, Wing, Rod, Arruda, Paulo
Publicado em 2012

Human gut microbiota in obesity and after gastric bypass

Por Zhang, Husen, DiBaise, John K., Zuccolo, Andrea, Kudrna, Dave, Braidotti, Michele, Yu, Yeisoo, Parameswaran, Prathap, Crowell, Michael D., Wing, Rod, Rittmann, Bruce E., Krajmalnik-Brown, Rosa
Publicado em 2009

Sequencing, Mapping, and Analysis of 27,455 Maize Full-Length cDNAs

Por Soderlund, Carol, Descour, Anne, Kudrna, Dave, Bomhoff, Matthew, Boyd, Lomax, Currie, Jennifer, Angelova, Angelina, Collura, Kristi, Wissotski, Marina, Ashley, Elizabeth, Morrow, Darren, Fernandes, John, Walbot, Virginia, Yu, Yeisoo
Publicado em 2009

Construction of a bacterial artificial chromosome library from the spikemoss Selaginella moellendorffii: a new resource for plant comparative genomics

Por Wang, Wenming, Tanurdzic, Milos, Luo, Meizhong, Sisneros, Nicholas, Kim, Hye Ran, Weng, Jing-Ke, Kudrna, Dave, Mueller, Christopher, Arumuganathan, K, Carlson, John, Chapple, Clint, de Pamphilis, Claude, Mandoli, Dina, Tomkins, Jeff, Wing, Rod A, Banks, Jo Ann
Publicado em 2005

An Integrated Physical, Genetic and Cytogenetic Map of Brachypodium distachyon, a Model System for Grass Research

Por Febrer, Melanie, Goicoechea, Jose Luis, Wright, Jonathan, McKenzie, Neil, Song, Xiang, Lin, Jinke, Collura, Kristi, Wissotski, Marina, Yu, Yeisoo, Ammiraju, Jetty S. S., Wolny, Elzbieta, Idziak, Dominika, Betekhtin, Alexander, Kudrna, Dave, Hasterok, Robert, Wing, Rod A., Bevan, Michael W.
Publicado em 2010

Construction of a nurse shark (Ginglymostoma cirratum) bacterial artificial chromosome (BAC) library and a preliminary genome survey

Por Luo, Meizhong, Kim, HyeRan, Kudrna, Dave, Sisneros, Nicholas B, Lee, So-Jeong, Mueller, Christopher, Collura, Kristi, Zuccolo, Andrea, Buckingham, E Bryan, Grim, Suzanne M, Yanagiya, Kazuyo, Inoko, Hidetoshi, Shiina, Takashi, Flajnik, Martin F, Wing, Rod A, Ohta, Yuko
Publicado em 2006

Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement

Por De Vega, Jose J., Ayling, Sarah, Hegarty, Matthew, Kudrna, Dave, Goicoechea, Jose L., Ergon, Åshild, Rognli, Odd A., Jones, Charlotte, Swain, Martin, Geurts, Rene, Lang, Chunting, Mayer, Klaus F. X., Rössner, Stephan, Yates, Steven, Webb, Kathleen J., Donnison, Iain S., Oldroyd, Giles E. D., Wing, Rod A., Caccamo, Mario, Powell, Wayne, Abberton, Michael T., Skøt, Leif
Publicado no Sci Rep (2015)

Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus Oryza and in Sorghum

Por Hass-Jacobus, Barbara L, Futrell-Griggs, Montona, Abernathy, Brian, Westerman, Rick, Goicoechea, Jose-Luis, Stein, Joshua, Klein, Patricia, Hurwitz, Bonnie, Zhou, Bin, Rakhshan, Fariborz, Sanyal, Abhijit, Gill, Navdeep, Lin, Jer-Young, Walling, Jason G, Luo, Mei Zhong, Ammiraju, Jetty Siva S, Kudrna, Dave, Kim, Hye Ran, Ware, Doreen, Wing, Rod A, Miguel, Phillip San, Jackson, Scott A
Publicado em 2006

The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus...

Por Ammiraju, Jetty S.S., Luo, Meizhong, Goicoechea, José L., Wang, Wenming, Kudrna, Dave, Mueller, Christopher, Talag, Jayson, Kim, HyeRan, Sisneros, Nicholas B., Blackmon, Barbara, Fang, Eric, Tomkins, Jeffery B., Brar, Darshan, MacKill, David, McCouch, Susan, Kurata, Nori, Lambert, Georgina, Galbraith, David W., Arumuganathan, K., Rao, Kiran, Walling, Jason G., Gill, Navdeep, Yu, Yeisoo, SanMiguel, Phillip, Soderlund, Carol, Jackson, Scott, Wing, Rod A.
Publicado em 2006

Building two indica rice reference genomes with PacBio long-read and Illumina paired-end sequencing data

Por Zhang, Jianwei, Chen, Ling-Ling, Sun, Shuai, Kudrna, Dave, Copetti, Dario, Li, Weiming, Mu, Ting, Jiao, Wen-Biao, Xing, Feng, Lee, Seunghee, Talag, Jayson, Song, Jia-Ming, Du, Bogu, Xie, Weibo, Luo, Meizhong, Maldonado, Carlos Ernesto, Goicoechea, Jose Luis, Xiong, Lizhong, Wu, Changyin, Xing, Yongzhong, Zhou, Dao-xiu, Yu, Sibin, Zhao, Yu, Wang, Gongwei, Yu, Yeisoo, Luo, Yijie, Hurtado, Beatriz Elena Padilla, Danowitz, Ann, Wing, Rod A., Zhang, Qifa
Publicado no Sci Data (2016)

A draft physical map of a D-genome cotton species (Gossypium raimondii)

Por Lin, Lifeng, Pierce, Gary J, Bowers, John E, Estill, James C, Compton, Rosana O, Rainville, Lisa K, Kim, Changsoo, Lemke, Cornelia, Rong, Junkang, Tang, Haibao, Wang, Xiyin, Braidotti, Michele, Chen, Amy H, Chicola, Kristen, Collura, Kristi, Epps, Ethan, Golser, Wolfgang, Grover, Corrinne, Ingles, Jennifer, Karunakaran, Santhosh, Kudrna, Dave, Olive, Jaime, Tabassum, Nabila, Um, Eareana, Wissotski, Marina, Yu, Yeisoo, Zuccolo, Andrea, ur Rahman, Mehboob, Peterson, Daniel G, Wing, Rod A, Wendel, Jonathan F, Paterson, Andrew H
Publicado em 2010

A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure

Por Zuccolo, Andrea, Bowers, John E, Estill, James C, Xiong, Zhiyong, Luo, Meizhong, Sebastian, Aswathy, Goicoechea, José Luis, Collura, Kristi, Yu, Yeisoo, Jiao, Yuannian, Duarte, Jill, Tang, Haibao, Ayyampalayam, Saravanaraj, Rounsley, Steve, Kudrna, Dave, Paterson, Andrew H, Pires, J Chris, Chanderbali, Andre, Soltis, Douglas E, Chamala, Srikar, Barbazuk, Brad, Soltis, Pamela S, Albert, Victor A, Ma, Hong, Mandoli, Dina, Banks, Jody, Carlson, John E, Tomkins, Jeffrey, dePamphilis, Claude W, Wing, Rod A, Leebens-Mack, Jim
Publicado em 2011

Sequencing of 15 622 gene‐bearing BACs clarifies the gene‐dense regions of the barley genome

Por Muñoz‐Amatriaín, María, Lonardi, Stefano, Luo, MingCheng, Madishetty, Kavitha, Svensson, Jan T., Moscou, Matthew J., Wanamaker, Steve, Jiang, Tao, Kleinhofs, Andris, Muehlbauer, Gary J., Wise, Roger P., Stein, Nils, Ma, Yaqin, Rodriguez, Edmundo, Kudrna, Dave, Bhat, Prasanna R., Chao, Shiaoman, Condamine, Pascal, Heinen, Shane, Resnik, Josh, Wing, Rod, Witt, Heather N., Alpert, Matthew, Beccuti, Marco, Bozdag, Serdar, Cordero, Francesca, Mirebrahim, Hamid, Ounit, Rachid, Wu, Yonghui, You, Frank, Zheng, Jie, Simková, Hana, Dolezel, Jaroslav, Grimwood, Jane, Schmutz, Jeremy, Duma, Denisa, Altschmied, Lothar, Blake, Tom, Bregitzer, Phil, Cooper, Laurel, Dilbirligi, Muharrem, Falk, Anders, Feiz, Leila, Graner, Andreas, Gustafson, Perry, Hayes, Patrick M., Lemaux, Peggy, Mammadov, Jafar, Close, Timothy J.
Publicado no Plant J (2015)