Trips-Viz: an environment for the analysis of public and user-generated ribosome profiling data

le Kiniry, Stephen J, Judge, Ciara E, Michel, Audrey M, Baranov, Pavel V
Foilsithe in Nucleic Acids Res (2021)

Trips-Viz: a transcriptome browser for exploring Ribo-Seq data

le Kiniry, Stephen J, O’Connor, Patrick B F, Michel, Audrey M, Baranov, Pavel V
Foilsithe in Nucleic Acids Res (2019)

GWIPS-viz: 2018 update

le Michel, Audrey M, Kiniry, Stephen J, O’Connor, Patrick B F, Mullan, James P, Baranov, Pavel V
Foilsithe in Nucleic Acids Res (2018)

TASEP modelling provides a parsimonious explanation for the ability of a single uORF to derepress translation during the integrated stress response

le Andreev, Dmitry E, Arnold, Maxim, Kiniry, Stephen J, Loughran, Gary, Michel, Audrey M, Rachinskii, Dmitrii, Baranov, Pavel V
Foilsithe in eLife (2018)

Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling

le Gerresheim, Gesche K., Bathke, Jochen, Michel, Audrey M., Andreev, Dmitri E., Shalamova, Lyudmila A., Rossbach, Oliver, Hu, Pan, Glebe, Dieter, Fricke, Markus, Marz, Manja, Goesmann, Alexander, Kiniry, Stephen J., Baranov, Pavel V., Shatsky, Ivan N., Niepmann, Michael
Foilsithe in Int J Mol Sci (2019)

Unusually efficient CUG initiation of an overlapping reading frame in POLG mRNA yields novel protein POLGARF

le Loughran, Gary, Zhdanov, Alexander V., Mikhaylova, Maria S., Rozov, Fedor N., Datskevich, Petr N., Kovalchuk, Sergey I., Serebryakova, Marina V., Kiniry, Stephen J., Michel, Audrey M., O’Connor, Patrick B. F., Papkovsky, Dmitri B., Atkins, John F., Baranov, Pavel V., Shatsky, Ivan N., Andreev, Dmitry E.
Foilsithe in Proc Natl Acad Sci U S A (2020)

eIF2α controls memory consolidation via excitatory and somatostatin neurons

le Sharma, Vijendra, Sood, Rapita, Khlaifia, Abdessattar, Eslamizade, Mohammad Javad, Hung, Tzu-Yu, Lou, Danning, Asgarihafshejani, Azam, Lalzar, Maya, Kiniry, Stephen J., Stokes, Matthew P., Cohen, Noah, Nelson, Alissa J., Abell, Kathryn, Possemato, Anthony P., Gal-Ben-Ari, Shunit, Truong, Vinh T., Wang, Peng, Yiannakas, Adonis, Saffarzadeh, Fatemeh, Claudio Cuello, A., Nader, Karim, Kaufman, Randal J., Costa-Mattioli, Mauro, Baranov, Pavel V., Quintana, Albert, Sanz, Elisenda, Khoutorsky, Arkady, Lacaille, Jean-Claude, Rosenblum, Kobi, Sonenberg, Nahum
Foilsithe in Nature (2020)