Comparative survey of the relative impact of mRNA features on local ribosome profiling read density

Por O'Connor, Patrick B. F., Andreev, Dmitry E., Baranov, Pavel V.
Publicado no Nat Commun (2016)

Trips-Viz: a transcriptome browser for exploring Ribo-Seq data

Por Kiniry, Stephen J, O’Connor, Patrick B F, Michel, Audrey M, Baranov, Pavel V
Publicado no Nucleic Acids Res (2019)

rRNA:mRNA pairing alters the length and the symmetry of mRNA-protected fragments in ribosome profiling experiments

Por O’Connor, Patrick B. F., Li, Gene-Wei, Weissman, Jonathan S., Atkins, John F., Baranov, Pavel V.
Publicado em 2013

GWIPS-viz: 2018 update

Por Michel, Audrey M, Kiniry, Stephen J, O’Connor, Patrick B F, Mullan, James P, Baranov, Pavel V
Publicado no Nucleic Acids Res (2018)

Insights into the mechanisms of eukaryotic translation gained with ribosome profiling

Por Andreev, Dmitry E., O'Connor, Patrick B. F., Loughran, Gary, Dmitriev, Sergey E., Baranov, Pavel V., Shatsky, Ivan N.
Publicado no Nucleic Acids Res (2017)

RiboGalaxy: A browser based platform for the alignment, analysis and visualization of ribosome profiling data

Por Michel, Audrey M., Mullan, James P. A., Velayudhan, Vimalkumar, O'Connor, Patrick B. F., Donohue, Claire A., Baranov, Pavel V.
Publicado no RNA Biol (2016)

The effect of heterogeneous Transcription Start Sites (TSS) on the translatome: implications for the mammalian cellular phenotype

Por Dieudonné, Francois-Xavier, O’Connor, Patrick B. F., Gubler-Jaquier, Pascale, Yasrebi, Haleh, Conne, Beatrice, Nikolaev, Sergey, Antonarakis, Stylianos, Baranov, Pavel V., Curran, Joseph
Publicado no BMC Genomics (2015)

Itm2a silencing rescues lamin A mediated inhibition of 3T3-L1 adipocyte differentiation

Por Davies, Stephanie J., Ryan, James, O'Connor, Patrick B. F., Kenny, Elaine, Morris, Derek, Baranov, Pavel V., O'Connor, Rosemary, McCarthy, Tommie V.
Publicado no Adipocyte (2017)

GWIPS-viz: development of a ribo-seq genome browser

Por Michel, Audrey M., Fox, Gearoid, M. Kiran, Anmol, De Bo, Christof, O’Connor, Patrick B. F., Heaphy, Stephen M., Mullan, James P. A., Donohue, Claire A., Higgins, Desmond G., Baranov, Pavel V.
Publicado em 2014