Knockout of IRF7 Highlights its Modulator Function of Host Response Against Avian Influenza Virus and the Involvement of MAPK and TOR Signaling Pathways in Chicken

Tekijä Kim, Tae Hyun, Kern, Colin, Zhou, Huaijun
Julkaisussa Genes (Basel) (2020)

Integrative analysis of gut microbiome and metabolites revealed novel mechanisms of intestinal Salmonella carriage in chicken

Tekijä Mon, Khin K. Z., Zhu, Yuhua, Chanthavixay, Ganrea, Kern, Colin, Zhou, Huaijun
Julkaisussa Sci Rep (2020)

Tolerogenic Immunoregulation towards Salmonella Enteritidis Contributes to Colonization Persistence in Young Chicks

Tekijä Mon, Khin K. Z., Kern, Colin, Chanthavixay, Ganrea, Wang, Ying, Zhou, Huaijun
Julkaisussa Infect Immun (2021)

Integrated Transcriptome and Histone Modification Analysis Reveals NDV Infection Under Heat Stress Affects Bursa Development and Proliferation in Susceptible Chicken Line

Tekijä Chanthavixay, Ganrea, Kern, Colin, Wang, Ying, Saelao, Perot, Lamont, Susan J., Gallardo, Rodrigo A., Rincon, Gonzalo, Zhou, Huaijun
Julkaisussa Front Genet (2020)

Transcript profiling of bovine embryos implicates specific transcription factors in the maternal-to-embryo transition

Tekijä Bogliotti, Yanina S, Chung, Nhi, Paulson, Erika E, Chitwood, James, Halstead, Michelle, Kern, Colin, Schultz, Richard M, Ross, Pablo J
Julkaisussa Biol Reprod (2020)

Liver Transcriptome Responses to Heat Stress and Newcastle Disease Virus Infection in Genetically Distinct Chicken Inbred Lines

Tekijä Wang, Ying, Saelao, Perot, Kern, Colin, Jin, Sihua, Gallardo, Rodrigo A., Kelly, Terra, Dekkers, Jack M., Lamont, Susan J., Zhou, Huaijun
Julkaisussa Genes (Basel) (2020)

Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

Tekijä Kern, Colin, Wang, Ying, Chitwood, James, Korf, Ian, Delany, Mary, Cheng, Hans, Medrano, Juan F., Van Eenennaam, Alison L., Ernst, Catherine, Ross, Pablo, Zhou, Huaijun
Julkaisussa BMC Genomics (2018)

Functionally Annotating Regulatory Elements in the Equine Genome Using Histone Mark ChIP-Seq

Tekijä Kingsley, N. B., Kern, Colin, Creppe, Catherine, Hales, Erin N., Zhou, Huaijun, Kalbfleisch, T. S., MacLeod, James N., Petersen, Jessica L., Finno, Carrie J., Bellone, Rebecca R.
Julkaisussa Genes (Basel) (2019)

A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues

Tekijä Halstead, Michelle M., Kern, Colin, Saelao, Perot, Wang, Ying, Chanthavixay, Ganrea, Medrano, Juan F., Van Eenennaam, Alison L., Korf, Ian, Tuggle, Christopher K., Ernst, Catherine W., Zhou, Huaijun, Ross, Pablo J.
Julkaisussa BMC Genomics (2020)

Primary Chicken and Duck Endothelial Cells Display a Differential Response to Infection with Highly Pathogenic Avian Influenza Virus

Tekijä Tong, Zhen Wei Marcus, Karawita, Anjana C., Kern, Colin, Zhou, Huaijun, Sinclair, Jane E., Yan, Limin, Chew, Keng Yih, Lowther, Sue, Trinidad, Lee, Challagulla, Arjun, Schat, Karel A., Baker, Michelle L., Short, Kirsty R.
Julkaisussa Genes (Basel) (2021)

Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research

Tekijä Kern, Colin, Wang, Ying, Xu, Xiaoqin, Pan, Zhangyuan, Halstead, Michelle, Chanthavixay, Ganrea, Saelao, Perot, Waters, Susan, Xiang, Ruidong, Chamberlain, Amanda, Korf, Ian, Delany, Mary E., Cheng, Hans H., Medrano, Juan F., Van Eenennaam, Alison L., Tuggle, Chris K., Ernst, Catherine, Flicek, Paul, Quon, Gerald, Ross, Pablo, Zhou, Huaijun
Julkaisussa Nat Commun (2021)

Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling

Tekijä Rice, Edward S., Kohno, Satomi, John, John St., Pham, Son, Howard, Jonathan, Lareau, Liana F., O'Connell, Brendan L., Hickey, Glenn, Armstrong, Joel, Deran, Alden, Fiddes, Ian, Platt, Roy N., Gresham, Cathy, McCarthy, Fiona, Kern, Colin, Haan, David, Phan, Tan, Schmidt, Carl, Sanford, Jeremy R., Ray, David A., Paten, Benedict, Guillette, Louis J., Green, Richard E.
Julkaisussa Genome Res (2017)

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

Tekijä Green, Richard E, Braun, Edward L, Armstrong, Joel, Earl, Dent, Nguyen, Ngan, Hickey, Glenn, Vandewege, Michael W, St John, John A, Capella-Gutiérrez, Salvador, Castoe, Todd A, Kern, Colin, Fujita, Matthew K, Opazo, Juan C, Jurka, Jerzy, Kojima, Kenji K, Caballero, Juan, Hubley, Robert M, Smit, Arian F, Platt, Roy N, Lavoie, Christine A, Ramakodi, Meganathan P, Finger, John W, Suh, Alexander, Isberg, Sally R, Miles, Lee, Chong, Amanda Y, Jaratlerdsiri, Weerachai, Gongora, Jaime, Moran, Christopher, Iriarte, Andrés, McCormack, John, Burgess, Shane C, Edwards, Scott V, Lyons, Eric, Williams, Christina, Breen, Matthew, Howard, Jason T, Gresham, Cathy R, Peterson, Daniel G, Schmitz, Jürgen, Pollock, David D, Haussler, David, Triplett, Eric W, Zhang, Guojie, Irie, Naoki, Jarvis, Erich D, Brochu, Christopher A, Schmidt, Carl J, McCarthy, Fiona M, Faircloth, Brant C, Hoffmann, Federico G, Glenn, Travis C, Gabaldón, Toni, Paten, Benedict, Ray, David A
Julkaisussa Science (2014)