JobCenter: an open source, cross-platform, and distributed job queue management system optimized for scalability and versatility

Por Jaschob, Daniel, Riffle, Michael
Publicado em 2012

SnipViz: a compact and lightweight web site widget for display and dissemination of multiple versions of gene and protein sequences

Por Jaschob, Daniel, Davis, Trisha N, Riffle, Michael
Publicado em 2014

Mason: a JavaScript web site widget for visualizing and comparing annotated features in nucleotide or protein sequences

Por Jaschob, Daniel, Davis, Trisha N, Riffle, Michael
Publicado no BMC Res Notes (2015)

ProXL (Protein Cross-Linking Database): A Platform for Analysis, Visualization, and Sharing of Protein Cross-Linking Mass Spectrometry Data

Por Riffle, Michael, Jaschob, Daniel, Zelter, Alex, Davis, Trisha N.
Publicado no J Proteome Res (2016)

Visualization and Dissemination of Multidimensional Proteomics Data Comparing Protein Abundance During Caenorhabditis elegans Development

Por Riffle, Michael, Merrihew, Gennifer E., Jaschob, Daniel, Sharma, Vagisha, Davis, Trisha N., Noble, William S., MacCoss, Michael J.
Publicado no J Am Soc Mass Spectrom (2015)

Determining Protein Complex Structures Based on a Bayesian Model of in Vivo Förster Resonance Energy Transfer (FRET) Data

Por Bonomi, Massimiliano, Pellarin, Riccardo, Kim, Seung Joong, Russel, Daniel, Sundin, Bryan A., Riffle, Michael, Jaschob, Daniel, Ramsden, Richard, Davis, Trisha N., Muller, Eric G. D., Sali, Andrej
Publicado no Mol Cell Proteomics (2014)

The molecular architecture of the Dam1 kinetochore complex is defined by cross-linking based structural modelling

Por Zelter, Alex, Bonomi, Massimiliano, Kim, Jae ook, Umbreit, Neil T., Hoopmann, Michael R., Johnson, Richard, Riffle, Michael, Jaschob, Daniel, MacCoss, Michael J., Moritz, Robert L., Davis, Trisha N.
Publicado no Nat Commun (2015)

Dissecting DNA damage response pathways by analyzing protein localization and abundance changes during DNA replication stress

Por Tkach, Johnny M., Yimit, Askar, Lee, Anna Y., Riffle, Michael, Costanzo, Michael, Jaschob, Daniel, Hendry, Jason A., Ou, Jiongwen, Moffat, Jason, Boone, Charles, Davis, Trisha N., Nislow, Corey, Brown, Grant W.
Publicado em 2012

(P1) Technology Development in a Multidisciplinary Center

Por Davis, Trisha, Skelly, Daniel A., Merrihew, Gennifer, Riffle, Michael, Cooper, Sara J., Mitchell, Emily, Graczyk, Beth, Sharma, Vagisha, Jaschob, Daniel, Noble, William S., Fields, Stanley, MacCoss, Michael J., Muller, Eric G., Dunham, Maitreya, Akey, Joshua M.
Publicado em 2012

Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast

Por Skelly, Daniel A., Merrihew, Gennifer E., Riffle, Michael, Connelly, Caitlin F., Kerr, Emily O., Johansson, Marnie, Jaschob, Daniel, Graczyk, Beth, Shulman, Nicholas J., Wakefield, Jon, Cooper, Sara J., Fields, Stanley, Noble, William S., Muller, Eric G.D., Davis, Trisha N., Dunham, Maitreya J., MacCoss, Michael J., Akey, Joshua M.
Publicado em 2013