Image Data Sharing for Biomedical Research—Meeting HIPAA Requirements for De-identification

по Freymann, John B., Kirby, Justin S., Perry, John H., Clunie, David A., Jaffe, C. Carl
Опубликовано 2011

Quantitative Imaging Network: Data Sharing and Competitive AlgorithmValidation Leveraging The Cancer Imaging Archive

по Kalpathy-Cramer, Jayashree, Freymann, John Blake, Kirby, Justin Stephen, Kinahan, Paul Eugene, Prior, Fred William
Опубликовано 2014

Call for Data Standardization: Lessons Learned and Recommendations in an Imaging Study

по Basu, Amrita, Warzel, Denise, Eftekhari, Aras, Kirby, Justin S., Freymann, John, Knable, Janice, Sharma, Ashish, Jacobs, Paula
Опубликовано в: JCO Clin Cancer Inform (2019)

The public cancer radiology imaging collections of The Cancer Imaging Archive

по Prior, Fred, Smith, Kirk, Sharma, Ashish, Kirby, Justin, Tarbox, Lawrence, Clark, Ken, Bennett, William, Nolan, Tracy, Freymann, John
Опубликовано в: Sci Data (2017)

Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features

по Bakas, Spyridon, Akbari, Hamed, Sotiras, Aristeidis, Bilello, Michel, Rozycki, Martin, Kirby, Justin S., Freymann, John B., Farahani, Keyvan, Davatzikos, Christos
Опубликовано в: Sci Data (2017)

TCIA: An Information Resource to Enable Open Science()

по Prior, Fred W., Clark, Ken, Commean, Paul, Freymann, John, Jaffe, Carl, Kirby, Justin, Moore, Stephen, Smith, Kirk, Tarbox, Lawrence, Vendt, Bruce, Marquez, Guillermo
Опубликовано в: Conf Proc IEEE Eng Med Biol Soc (2013)

The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository

по Clark, Kenneth, Vendt, Bruce, Smith, Kirk, Freymann, John, Kirby, Justin, Koppel, Paul, Moore, Stephen, Phillips, Stanley, Maffitt, David, Pringle, Michael, Tarbox, Lawrence, Prior, Fred
Опубликовано 2013

DICOM re‐encoding of volumetrically annotated Lung Imaging Database Consortium (LIDC) nodules

по Fedorov, Andrey, Hancock, Matthew, Clunie, David, Brochhausen, Mathias, Bona, Jonathan, Kirby, Justin, Freymann, John, Pieper, Steve, J. W. L. Aerts, Hugo, Kikinis, Ron, Prior, Fred
Опубликовано в: Med Phys (2020)

De-identification of Medical Images with Retention of Scientific Research Value

по Moore, Stephen M., Maffitt, David R., Smith, Kirk E., Kirby, Justin S., Clark, Kenneth W., Freymann, John B., Vendt, Bruce A., Tarbox, Lawrence R., Prior, Fred W.
Опубликовано в: Radiographics (2015)

Multiple-response regression analysis links magnetic resonance imaging features to de-regulated protein expression and pathway activity in lower grade glioma

по Lehrer, Michael, Bhadra, Anindya, Ravikumar, Visweswaran, Chen, James Y., Wintermark, Max, Hwang, Scott N., Holder, Chad A., Huang, Erich P., Fevrier-Sullivan, Brenda, Freymann, John B., Rao, Arvind
Опубликовано в: Oncoscience (2017)

Design and Implementation of the Pre-Clinical DICOM Standard in Multi-Cohort Murine Studies

по Kalen, Joseph D., Clunie, David A., Liu, Yanling, Tatum, James L., Jacobs, Paula M., Kirby, Justin, Freymann, John B., Wagner, Ulrike, Smith, Kirk E., Suloway, Christian, Doroshow, James H.
Опубликовано в: Tomography (2021)

Genomic Mapping and Survival Prediction in Glioblastoma: Molecular Subclassification Strengthened by Hemodynamic Imaging Biomarkers

по Jain, Rajan, Poisson, Laila, Narang, Jayant, Gutman, David, Scarpace, Lisa, Hwang, Scott N., Holder, Chad, Wintermark, Max, Colen, Rivka R., Kirby, Justin, Freymann, John, Brat, Daniel J., Jaffe, Carl, Mikkelsen, Tom
Опубликовано 2013

Radiogenomics of High-Grade Serous Ovarian Cancer: Multireader Multi-Institutional Study from the Cancer Genome Atlas Ovarian Cancer Imaging Research Group

по Vargas, Hebert Alberto, Huang, Erich P., Lakhman, Yulia, Ippolito, Joseph E., Bhosale, Priya, Mellnick, Vincent, Shinagare, Atul B., Anello, Maria, Kirby, Justin, Fevrier-Sullivan, Brenda, Freymann, John, Jaffe, C. Carl, Sala, Evis
Опубликовано в: Radiology (2017)

Outcome Prediction in Patients with Glioblastoma by Using Imaging, Clinical, and Genomic Biomarkers: Focus on the Nonenhancing Component of the Tumor

по Jain, Rajan, Poisson, Laila M., Gutman, David, Scarpace, Lisa, Hwang, Scott N., Holder, Chad A., Wintermark, Max, Rao, Arvind, Colen, Rivka R., Kirby, Justin, Freymann, John, Jaffe, C. Carl, Mikkelsen, Tom, Flanders, Adam
Опубликовано в: Radiology (2014)

A combinatorial radiographic phenotype may stratify patient survival and be associated with invasion and proliferation characteristics in glioblastoma

по Rao, Arvind, Rao, Ganesh, Gutman, David A., Flanders, Adam E., Hwang, Scott N., Rubin, Daniel L., Colen, Rivka R., Zinn, Pascal O., Jain, Rajan, Wintermark, Max, Kirby, Justin S., Jaffe, C. Carl, Freymann, John
Опубликовано в: J Neurosurg (2015)

Radiogenomics of clear cell renal cell carcinoma: preliminary findings of The Cancer Genome Atlas–Renal Cell Carcinoma (TCGA–RCC) Imaging Research Group

по Shinagare, Atul B., Vikram, Raghu, Jaffe, Carl, Akin, Oguz, Kirby, Justin, Huang, Erich, Freymann, John, Sainani, Nisha I., Sadow, Cheryl A., Bathala, Tharakeswara K., Rubin, Daniel L., Oto, Aytekin, Heller, Matthew T., Surabhi, Venkateswar R., Katabathina, Venkat, Silverman, Stuart G.
Опубликовано в: Abdom Imaging (2015)

Using Computer-extracted Image Phenotypes from Tumors on Breast MRI to Predict Breast Cancer Pathologic Stage

по Burnside, Elizabeth S., Drukker, Karen, Li, Hui, Bonaccio, Ermelinda, Zuley, Margarita, Ganott, Marie, Net, Jose M., Sutton, Elizabeth, Brandt, Kathleen R., Whitman, Gary, Conzen, Suzanne, Lan, Li, Ji, Yuan, Zhu, Yitan, Jaffe, Carl, Huang, Erich, Freymann, John, Kirby, Justin, Morris, Elizabeth, Giger, Maryellen
Опубликовано в: Cancer (2015)

Imaging genomic mapping of an invasive MRI phenotype predicts patient outcome and metabolic dysfunction: a TCGA glioma phenotype research group project

по Colen, Rivka R, Vangel, Mark, Wang, Jixin, Gutman, David A, Hwang, Scott N, Wintermark, Max, Jain, Rajan, Jilwan-Nicolas, Manal, Chen, James Y, Raghavan, Prashant, Holder, Chad A, Rubin, Daniel, Huang, Eric, Kirby, Justin, Freymann, John, Jaffe, Carl C, Flanders, Adam, Zinn, Pascal O
Опубликовано 2014

Multicenter imaging outcomes study of The Cancer Genome Atlas glioblastoma patient cohort: imaging predictors of overall and progression-free survival

по Wangaryattawanich, Pattana, Hatami, Masumeh, Wang, Jixin, Thomas, Ginu, Flanders, Adam, Kirby, Justin, Wintermark, Max, Huang, Erich S., Bakhtiari, Ali Shojaee, Luedi, Markus M., Hashmi, Syed S., Rubin, Daniel L., Chen, James Y., Hwang, Scott N., Freymann, John, Holder, Chad A., Zinn, Pascal O., Colen, Rivka R.
Опубликовано в: Neuro Oncol (2015)

Integration of proteomics with CT-based qualitative and radiomic features in high-grade serous ovarian cancer patients: an exploratory analysis

по Beer, Lucian, Sahin, Hilal, Bateman, Nicholas W., Blazic, Ivana, Vargas, Hebert Alberto, Veeraraghavan, Harini, Kirby, Justin, Fevrier-Sullivan, Brenda, Freymann, John B., Jaffe, C. Carl, Brenton, James, Miccó, Maura, Nougaret, Stephanie, Darcy, Kathleen M., Maxwell, G. Larry, Conrads, Thomas P., Huang, Erich, Sala, Evis
Опубликовано в: Eur Radiol (2020)