Image Data Sharing for Biomedical Research—Meeting HIPAA Requirements for De-identification

Por Freymann, John B., Kirby, Justin S., Perry, John H., Clunie, David A., Jaffe, C. Carl
Publicado em 2011

Quantitative Imaging Network: Data Sharing and Competitive AlgorithmValidation Leveraging The Cancer Imaging Archive

Por Kalpathy-Cramer, Jayashree, Freymann, John Blake, Kirby, Justin Stephen, Kinahan, Paul Eugene, Prior, Fred William
Publicado em 2014

Call for Data Standardization: Lessons Learned and Recommendations in an Imaging Study

Por Basu, Amrita, Warzel, Denise, Eftekhari, Aras, Kirby, Justin S., Freymann, John, Knable, Janice, Sharma, Ashish, Jacobs, Paula
Publicado no JCO Clin Cancer Inform (2019)

The public cancer radiology imaging collections of The Cancer Imaging Archive

Por Prior, Fred, Smith, Kirk, Sharma, Ashish, Kirby, Justin, Tarbox, Lawrence, Clark, Ken, Bennett, William, Nolan, Tracy, Freymann, John
Publicado no Sci Data (2017)

Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features

Por Bakas, Spyridon, Akbari, Hamed, Sotiras, Aristeidis, Bilello, Michel, Rozycki, Martin, Kirby, Justin S., Freymann, John B., Farahani, Keyvan, Davatzikos, Christos
Publicado no Sci Data (2017)

TCIA: An Information Resource to Enable Open Science()

Por Prior, Fred W., Clark, Ken, Commean, Paul, Freymann, John, Jaffe, Carl, Kirby, Justin, Moore, Stephen, Smith, Kirk, Tarbox, Lawrence, Vendt, Bruce, Marquez, Guillermo
Publicado no Conf Proc IEEE Eng Med Biol Soc (2013)

The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository

Por Clark, Kenneth, Vendt, Bruce, Smith, Kirk, Freymann, John, Kirby, Justin, Koppel, Paul, Moore, Stephen, Phillips, Stanley, Maffitt, David, Pringle, Michael, Tarbox, Lawrence, Prior, Fred
Publicado em 2013

DICOM re‐encoding of volumetrically annotated Lung Imaging Database Consortium (LIDC) nodules

Por Fedorov, Andrey, Hancock, Matthew, Clunie, David, Brochhausen, Mathias, Bona, Jonathan, Kirby, Justin, Freymann, John, Pieper, Steve, J. W. L. Aerts, Hugo, Kikinis, Ron, Prior, Fred
Publicado no Med Phys (2020)

De-identification of Medical Images with Retention of Scientific Research Value

Por Moore, Stephen M., Maffitt, David R., Smith, Kirk E., Kirby, Justin S., Clark, Kenneth W., Freymann, John B., Vendt, Bruce A., Tarbox, Lawrence R., Prior, Fred W.
Publicado no Radiographics (2015)

Multiple-response regression analysis links magnetic resonance imaging features to de-regulated protein expression and pathway activity in lower grade glioma

Por Lehrer, Michael, Bhadra, Anindya, Ravikumar, Visweswaran, Chen, James Y., Wintermark, Max, Hwang, Scott N., Holder, Chad A., Huang, Erich P., Fevrier-Sullivan, Brenda, Freymann, John B., Rao, Arvind
Publicado no Oncoscience (2017)

Design and Implementation of the Pre-Clinical DICOM Standard in Multi-Cohort Murine Studies

Por Kalen, Joseph D., Clunie, David A., Liu, Yanling, Tatum, James L., Jacobs, Paula M., Kirby, Justin, Freymann, John B., Wagner, Ulrike, Smith, Kirk E., Suloway, Christian, Doroshow, James H.
Publicado no Tomography (2021)

Genomic Mapping and Survival Prediction in Glioblastoma: Molecular Subclassification Strengthened by Hemodynamic Imaging Biomarkers

Por Jain, Rajan, Poisson, Laila, Narang, Jayant, Gutman, David, Scarpace, Lisa, Hwang, Scott N., Holder, Chad, Wintermark, Max, Colen, Rivka R., Kirby, Justin, Freymann, John, Brat, Daniel J., Jaffe, Carl, Mikkelsen, Tom
Publicado em 2013

Radiogenomics of High-Grade Serous Ovarian Cancer: Multireader Multi-Institutional Study from the Cancer Genome Atlas Ovarian Cancer Imaging Research Group

Por Vargas, Hebert Alberto, Huang, Erich P., Lakhman, Yulia, Ippolito, Joseph E., Bhosale, Priya, Mellnick, Vincent, Shinagare, Atul B., Anello, Maria, Kirby, Justin, Fevrier-Sullivan, Brenda, Freymann, John, Jaffe, C. Carl, Sala, Evis
Publicado no Radiology (2017)

Outcome Prediction in Patients with Glioblastoma by Using Imaging, Clinical, and Genomic Biomarkers: Focus on the Nonenhancing Component of the Tumor

Por Jain, Rajan, Poisson, Laila M., Gutman, David, Scarpace, Lisa, Hwang, Scott N., Holder, Chad A., Wintermark, Max, Rao, Arvind, Colen, Rivka R., Kirby, Justin, Freymann, John, Jaffe, C. Carl, Mikkelsen, Tom, Flanders, Adam
Publicado no Radiology (2014)

A combinatorial radiographic phenotype may stratify patient survival and be associated with invasion and proliferation characteristics in glioblastoma

Por Rao, Arvind, Rao, Ganesh, Gutman, David A., Flanders, Adam E., Hwang, Scott N., Rubin, Daniel L., Colen, Rivka R., Zinn, Pascal O., Jain, Rajan, Wintermark, Max, Kirby, Justin S., Jaffe, C. Carl, Freymann, John
Publicado no J Neurosurg (2015)

Radiogenomics of clear cell renal cell carcinoma: preliminary findings of The Cancer Genome Atlas–Renal Cell Carcinoma (TCGA–RCC) Imaging Research Group

Por Shinagare, Atul B., Vikram, Raghu, Jaffe, Carl, Akin, Oguz, Kirby, Justin, Huang, Erich, Freymann, John, Sainani, Nisha I., Sadow, Cheryl A., Bathala, Tharakeswara K., Rubin, Daniel L., Oto, Aytekin, Heller, Matthew T., Surabhi, Venkateswar R., Katabathina, Venkat, Silverman, Stuart G.
Publicado no Abdom Imaging (2015)

Using Computer-extracted Image Phenotypes from Tumors on Breast MRI to Predict Breast Cancer Pathologic Stage

Por Burnside, Elizabeth S., Drukker, Karen, Li, Hui, Bonaccio, Ermelinda, Zuley, Margarita, Ganott, Marie, Net, Jose M., Sutton, Elizabeth, Brandt, Kathleen R., Whitman, Gary, Conzen, Suzanne, Lan, Li, Ji, Yuan, Zhu, Yitan, Jaffe, Carl, Huang, Erich, Freymann, John, Kirby, Justin, Morris, Elizabeth, Giger, Maryellen
Publicado no Cancer (2015)

Imaging genomic mapping of an invasive MRI phenotype predicts patient outcome and metabolic dysfunction: a TCGA glioma phenotype research group project

Por Colen, Rivka R, Vangel, Mark, Wang, Jixin, Gutman, David A, Hwang, Scott N, Wintermark, Max, Jain, Rajan, Jilwan-Nicolas, Manal, Chen, James Y, Raghavan, Prashant, Holder, Chad A, Rubin, Daniel, Huang, Eric, Kirby, Justin, Freymann, John, Jaffe, Carl C, Flanders, Adam, Zinn, Pascal O
Publicado em 2014

Multicenter imaging outcomes study of The Cancer Genome Atlas glioblastoma patient cohort: imaging predictors of overall and progression-free survival

Por Wangaryattawanich, Pattana, Hatami, Masumeh, Wang, Jixin, Thomas, Ginu, Flanders, Adam, Kirby, Justin, Wintermark, Max, Huang, Erich S., Bakhtiari, Ali Shojaee, Luedi, Markus M., Hashmi, Syed S., Rubin, Daniel L., Chen, James Y., Hwang, Scott N., Freymann, John, Holder, Chad A., Zinn, Pascal O., Colen, Rivka R.
Publicado no Neuro Oncol (2015)

Integration of proteomics with CT-based qualitative and radiomic features in high-grade serous ovarian cancer patients: an exploratory analysis

Por Beer, Lucian, Sahin, Hilal, Bateman, Nicholas W., Blazic, Ivana, Vargas, Hebert Alberto, Veeraraghavan, Harini, Kirby, Justin, Fevrier-Sullivan, Brenda, Freymann, John B., Jaffe, C. Carl, Brenton, James, Miccó, Maura, Nougaret, Stephanie, Darcy, Kathleen M., Maxwell, G. Larry, Conrads, Thomas P., Huang, Erich, Sala, Evis
Publicado no Eur Radiol (2020)