Image Data Sharing for Biomedical Research—Meeting HIPAA Requirements for De-identification

le Freymann, John B., Kirby, Justin S., Perry, John H., Clunie, David A., Jaffe, C. Carl
Foilsithe 2011

Quantitative Imaging Network: Data Sharing and Competitive AlgorithmValidation Leveraging The Cancer Imaging Archive

le Kalpathy-Cramer, Jayashree, Freymann, John Blake, Kirby, Justin Stephen, Kinahan, Paul Eugene, Prior, Fred William
Foilsithe 2014

Call for Data Standardization: Lessons Learned and Recommendations in an Imaging Study

le Basu, Amrita, Warzel, Denise, Eftekhari, Aras, Kirby, Justin S., Freymann, John, Knable, Janice, Sharma, Ashish, Jacobs, Paula
Foilsithe in JCO Clin Cancer Inform (2019)

The public cancer radiology imaging collections of The Cancer Imaging Archive

le Prior, Fred, Smith, Kirk, Sharma, Ashish, Kirby, Justin, Tarbox, Lawrence, Clark, Ken, Bennett, William, Nolan, Tracy, Freymann, John
Foilsithe in Sci Data (2017)

Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features

le Bakas, Spyridon, Akbari, Hamed, Sotiras, Aristeidis, Bilello, Michel, Rozycki, Martin, Kirby, Justin S., Freymann, John B., Farahani, Keyvan, Davatzikos, Christos
Foilsithe in Sci Data (2017)

TCIA: An Information Resource to Enable Open Science()

le Prior, Fred W., Clark, Ken, Commean, Paul, Freymann, John, Jaffe, Carl, Kirby, Justin, Moore, Stephen, Smith, Kirk, Tarbox, Lawrence, Vendt, Bruce, Marquez, Guillermo
Foilsithe in Conf Proc IEEE Eng Med Biol Soc (2013)

The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository

le Clark, Kenneth, Vendt, Bruce, Smith, Kirk, Freymann, John, Kirby, Justin, Koppel, Paul, Moore, Stephen, Phillips, Stanley, Maffitt, David, Pringle, Michael, Tarbox, Lawrence, Prior, Fred
Foilsithe 2013

DICOM re‐encoding of volumetrically annotated Lung Imaging Database Consortium (LIDC) nodules

le Fedorov, Andrey, Hancock, Matthew, Clunie, David, Brochhausen, Mathias, Bona, Jonathan, Kirby, Justin, Freymann, John, Pieper, Steve, J. W. L. Aerts, Hugo, Kikinis, Ron, Prior, Fred
Foilsithe in Med Phys (2020)

De-identification of Medical Images with Retention of Scientific Research Value

le Moore, Stephen M., Maffitt, David R., Smith, Kirk E., Kirby, Justin S., Clark, Kenneth W., Freymann, John B., Vendt, Bruce A., Tarbox, Lawrence R., Prior, Fred W.
Foilsithe in Radiographics (2015)

Multiple-response regression analysis links magnetic resonance imaging features to de-regulated protein expression and pathway activity in lower grade glioma

le Lehrer, Michael, Bhadra, Anindya, Ravikumar, Visweswaran, Chen, James Y., Wintermark, Max, Hwang, Scott N., Holder, Chad A., Huang, Erich P., Fevrier-Sullivan, Brenda, Freymann, John B., Rao, Arvind
Foilsithe in Oncoscience (2017)

Design and Implementation of the Pre-Clinical DICOM Standard in Multi-Cohort Murine Studies

le Kalen, Joseph D., Clunie, David A., Liu, Yanling, Tatum, James L., Jacobs, Paula M., Kirby, Justin, Freymann, John B., Wagner, Ulrike, Smith, Kirk E., Suloway, Christian, Doroshow, James H.
Foilsithe in Tomography (2021)

Genomic Mapping and Survival Prediction in Glioblastoma: Molecular Subclassification Strengthened by Hemodynamic Imaging Biomarkers

le Jain, Rajan, Poisson, Laila, Narang, Jayant, Gutman, David, Scarpace, Lisa, Hwang, Scott N., Holder, Chad, Wintermark, Max, Colen, Rivka R., Kirby, Justin, Freymann, John, Brat, Daniel J., Jaffe, Carl, Mikkelsen, Tom
Foilsithe 2013

Radiogenomics of High-Grade Serous Ovarian Cancer: Multireader Multi-Institutional Study from the Cancer Genome Atlas Ovarian Cancer Imaging Research Group

le Vargas, Hebert Alberto, Huang, Erich P., Lakhman, Yulia, Ippolito, Joseph E., Bhosale, Priya, Mellnick, Vincent, Shinagare, Atul B., Anello, Maria, Kirby, Justin, Fevrier-Sullivan, Brenda, Freymann, John, Jaffe, C. Carl, Sala, Evis
Foilsithe in Radiology (2017)

Outcome Prediction in Patients with Glioblastoma by Using Imaging, Clinical, and Genomic Biomarkers: Focus on the Nonenhancing Component of the Tumor

le Jain, Rajan, Poisson, Laila M., Gutman, David, Scarpace, Lisa, Hwang, Scott N., Holder, Chad A., Wintermark, Max, Rao, Arvind, Colen, Rivka R., Kirby, Justin, Freymann, John, Jaffe, C. Carl, Mikkelsen, Tom, Flanders, Adam
Foilsithe in Radiology (2014)

A combinatorial radiographic phenotype may stratify patient survival and be associated with invasion and proliferation characteristics in glioblastoma

le Rao, Arvind, Rao, Ganesh, Gutman, David A., Flanders, Adam E., Hwang, Scott N., Rubin, Daniel L., Colen, Rivka R., Zinn, Pascal O., Jain, Rajan, Wintermark, Max, Kirby, Justin S., Jaffe, C. Carl, Freymann, John
Foilsithe in J Neurosurg (2015)

Radiogenomics of clear cell renal cell carcinoma: preliminary findings of The Cancer Genome Atlas–Renal Cell Carcinoma (TCGA–RCC) Imaging Research Group

le Shinagare, Atul B., Vikram, Raghu, Jaffe, Carl, Akin, Oguz, Kirby, Justin, Huang, Erich, Freymann, John, Sainani, Nisha I., Sadow, Cheryl A., Bathala, Tharakeswara K., Rubin, Daniel L., Oto, Aytekin, Heller, Matthew T., Surabhi, Venkateswar R., Katabathina, Venkat, Silverman, Stuart G.
Foilsithe in Abdom Imaging (2015)

Using Computer-extracted Image Phenotypes from Tumors on Breast MRI to Predict Breast Cancer Pathologic Stage

le Burnside, Elizabeth S., Drukker, Karen, Li, Hui, Bonaccio, Ermelinda, Zuley, Margarita, Ganott, Marie, Net, Jose M., Sutton, Elizabeth, Brandt, Kathleen R., Whitman, Gary, Conzen, Suzanne, Lan, Li, Ji, Yuan, Zhu, Yitan, Jaffe, Carl, Huang, Erich, Freymann, John, Kirby, Justin, Morris, Elizabeth, Giger, Maryellen
Foilsithe in Cancer (2015)

Imaging genomic mapping of an invasive MRI phenotype predicts patient outcome and metabolic dysfunction: a TCGA glioma phenotype research group project

le Colen, Rivka R, Vangel, Mark, Wang, Jixin, Gutman, David A, Hwang, Scott N, Wintermark, Max, Jain, Rajan, Jilwan-Nicolas, Manal, Chen, James Y, Raghavan, Prashant, Holder, Chad A, Rubin, Daniel, Huang, Eric, Kirby, Justin, Freymann, John, Jaffe, Carl C, Flanders, Adam, Zinn, Pascal O
Foilsithe 2014

Multicenter imaging outcomes study of The Cancer Genome Atlas glioblastoma patient cohort: imaging predictors of overall and progression-free survival

le Wangaryattawanich, Pattana, Hatami, Masumeh, Wang, Jixin, Thomas, Ginu, Flanders, Adam, Kirby, Justin, Wintermark, Max, Huang, Erich S., Bakhtiari, Ali Shojaee, Luedi, Markus M., Hashmi, Syed S., Rubin, Daniel L., Chen, James Y., Hwang, Scott N., Freymann, John, Holder, Chad A., Zinn, Pascal O., Colen, Rivka R.
Foilsithe in Neuro Oncol (2015)

Integration of proteomics with CT-based qualitative and radiomic features in high-grade serous ovarian cancer patients: an exploratory analysis

le Beer, Lucian, Sahin, Hilal, Bateman, Nicholas W., Blazic, Ivana, Vargas, Hebert Alberto, Veeraraghavan, Harini, Kirby, Justin, Fevrier-Sullivan, Brenda, Freymann, John B., Jaffe, C. Carl, Brenton, James, Miccó, Maura, Nougaret, Stephanie, Darcy, Kathleen M., Maxwell, G. Larry, Conrads, Thomas P., Huang, Erich, Sala, Evis
Foilsithe in Eur Radiol (2020)