Removal of AU Bias from Microarray mRNA Expression Data Enhances Computational Identification of Active MicroRNAs

by Elkon, Ran, Agami, Reuven
Published 2008

Cell-type-specific analysis of alternative polyadenylation using single-cell transcriptomics data

by Shulman, Eldad David, Elkon, Ran
Published in Nucleic Acids Res (2019)

Systematic identification of functional SNPs interrupting 3’UTR polyadenylation signals

by Shulman, Eldad David, Elkon, Ran
Published in PLoS Genet (2020)

Genetic mapping of developmental trajectories for complex traits and diseases

by Shulman, Eldad David, Elkon, Ran
Published in Comput Struct Biotechnol J (2021)

Genomic meta-analysis of the interplay between 3D chromatin organization and gene expression programs under basal and stress conditions

by Nurick, Idan, Shamir, Ron, Elkon, Ran
Published in Epigenetics Chromatin (2018)

DOMINO: a network‐based active module identification algorithm with reduced rate of false calls

by Levi, Hagai, Elkon, Ran, Shamir, Ron
Published in Mol Syst Biol (2021)

Redifferentiation of expanded human islet β cells by inhibition of ARX

by Friedman-Mazursky, Orr, Elkon, Ran, Efrat, Shimon
Published in Sci Rep (2016)

Major role for mRNA stability in shaping the kinetics of gene induction

by Elkon, Ran, Zlotorynski, Eitan, Zeller, Karen I, Agami, Reuven
Published 2010

FOCS: a novel method for analyzing enhancer and gene activity patterns infers an extensive enhancer–promoter map

by Hait, Tom Aharon, Amar, David, Shamir, Ron, Elkon, Ran
Published in Genome Biol (2018)

Recurrent functional misinterpretation of RNA-seq data caused by sample-specific gene length bias

by Mandelboum, Shir, Manber, Zohar, Elroy-Stein, Orna, Elkon, Ran
Published in PLoS Biol (2019)

Functional genomic delineation of TLR-induced transcriptional networks

by Shiloh Yosef, Halperin Yonit, Linhart Chaim, Elkon Ran, Shamir Ron
Published 2007-10-01

Genome-Wide In Silico Identification of Transcriptional Regulators Controlling the Cell Cycle in Human Cells

by Elkon, Ran, Linhart, Chaim, Sharan, Roded, Shamir, Ron, Shiloh, Yosef
Published 2003

Functional genomic delineation of TLR-induced transcriptional networks

by Elkon, Ran, Linhart, Chaim, Halperin, Yonit, Shiloh, Yosef, Shamir, Ron
Published 2007

p53 induces transcriptional and translational programs to suppress cell proliferation and growth

by Loayza-Puch, Fabricio, Drost, Jarno, Rooijers, Koos, Lopes, Rui, Elkon, Ran, Agami, Reuven
Published 2013

In silico identification of transcriptional regulators associated with c-Myc

by Elkon, Ran, Zeller, Karen I., Linhart, Chaim, Dang, Chi V., Shamir, Ron, Shiloh, Yosef
Published 2004

Matrin 3 Binds and Stabilizes mRNA

by Salton, Maayan, Elkon, Ran, Borodina, Tatiana, Davydov, Aleksey, Yaspo, Marie-Laure, Halperin, Eran, Shiloh, Yosef
Published 2011

Expression pattern of cochlear microRNAs in the mammalian auditory hindbrain

by Krohs, Constanze, Bordeynik-Cohen, Mor, Messika-Gold, Naama, Elkon, Ran, Avraham, Karen B., Nothwang, Hans Gerd
Published in Cell Tissue Res (2020)

EXPANDER – an integrative program suite for microarray data analysis

by Shamir, Ron, Maron-Katz, Adi, Tanay, Amos, Linhart, Chaim, Steinfeld, Israel, Sharan, Roded, Shiloh, Yosef, Elkon, Ran
Published 2005

E2F mediates enhanced alternative polyadenylation in proliferation

by Elkon, Ran, Drost, Jarno, van Haaften, Gijs, Jenal, Mathias, Schrier, Mariette, Oude Vrielink, Joachim AF, Agami, Reuven
Published 2012

Proteomic analysis of polyribosomes identifies splicing factors as potential regulators of translation during mitosis

by Aviner, Ranen, Hofmann, Sarah, Elman, Tamar, Shenoy, Anjana, Geiger, Tamar, Elkon, Ran, Ehrlich, Marcelo, Elroy-Stein, Orna
Published in Nucleic Acids Res (2017)