OmicsViz: Cytoscape plug-in for visualizing omics data across species

di Xia, Tian, Dickerson, Julie A.
Pubblicazione 2008

Tissue-specific mouse mRNA isoform networks

di Kandoi, Gaurav, Dickerson, Julie A.
Pubblicato in Sci Rep (2019)

PathwayAccess: CellDesigner plugins for pathway databases

di Van Hemert, John L., Dickerson, Julie A.
Pubblicazione 2010

OmicsAnalyzer: a Cytoscape plug-in suite for modeling omics data

di Xia, Tian, Hemert, John V., Dickerson, Julie A.
Pubblicazione 2010

CytoModeler: a tool for bridging large-scale network analysis and dynamic quantitative modeling

di Xia, Tian, Van Hemert, John, Dickerson, Julie A.
Pubblicazione 2011

Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities

di Fu, Yao, Jarboe, Laura R, Dickerson, Julie A
Pubblicazione 2011

Comparisons of computational methods for differential alternative splicing detection using RNA-seq in plant systems

di Liu, Ruolin, Loraine, Ann E, Dickerson, Julie A
Pubblicato in BMC Bioinformatics (2014)

DiffSLC: A graph centrality method to detect essential proteins of a protein-protein interaction network

di Mistry, Divya, Wise, Roger P., Dickerson, Julie A.
Pubblicato in PLoS One (2017)

A computational platform to maintain and migrate manual functional annotations for BioCyc databases

di Walsh, Jesse R, Sen, Taner Z, Dickerson, Julie A
Pubblicazione 2014

<it>Arabidopsis </it>gene co-expression network and its functional modules

di Dash Sudhansu, Van Hemert John L, Mao Linyong, Dickerson Julie A
Pubblicazione 2009-10-01

Arabidopsis gene co-expression network and its functional modules

di Mao, Linyong, Van Hemert, John L, Dash, Sudhansu, Dickerson, Julie A
Pubblicazione 2009

Network motif comparison rationalizes Sec1/Munc18-SNARE regulation mechanism in exocytosis

di Xia, Tian, Tong, Jiansong, Rathore, Shailendra S, Gu, Xun, Dickerson, Julie A
Pubblicazione 2012

MetNetGE: interactive views of biological networks and ontologies

di Jia, Ming, Choi, Suh-Yeon, Reiners, Dirk, Wurtele, Eve S, Dickerson, Julie A
Pubblicazione 2010

Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics—database and tools update

di Bais, Preeti, Moon-Quanbeck, Stephanie M., Nikolau, Basil J., Dickerson, Julie A.
Pubblicazione 2012

PLEXdb: gene expression resources for plants and plant pathogens

di Dash, Sudhansu, Van Hemert, John, Hong, Lu, Wise, Roger P., Dickerson, Julie A.
Pubblicazione 2012

VitisNet: “Omics” Integration through Grapevine Molecular Networks

di Grimplet, Jérôme, Cramer, Grant R., Dickerson, Julie A., Mathiason, Kathy, Van Hemert, John, Fennell, Anne Y.
Pubblicazione 2009

BarleyBase—an expression profiling database for plant genomics

di Shen, Lishuang, Gong, Jian, Caldo, Rico A., Nettleton, Dan, Cook, Dianne, Wise, Roger P., Dickerson, Julie A.
Pubblicazione 2005

The quality of metabolic pathway resources depends on initial enzymatic function assignments: a case for maize

di Walsh, Jesse R., Schaeffer, Mary L., Zhang, Peifen, Rhee, Seung Y., Dickerson, Julie A., Sen, Taner Z.
Pubblicato in BMC Syst Biol (2016)

A New Resource for Cereal Genomics: 22K Barley GeneChip Comes of Age

di Close, Timothy J., Wanamaker, Steve I., Caldo, Rico A., Turner, Stacy M., Ashlock, Daniel A., Dickerson, Julie A., Wing, Rod A., Muehlbauer, Gary J., Kleinhofs, Andris, Wise, Roger P.
Pubblicazione 2004

PlantMetabolomics.org: A Web Portal for Plant Metabolomics Experiments(1)([C])([W])([OA])

di Bais, Preeti, Moon, Stephanie M., He, Kun, Leitao, Ricardo, Dreher, Kate, Walk, Tom, Sucaet, Yves, Barkan, Lenore, Wohlgemuth, Gert, Roth, Mary R., Wurtele, Eve Syrkin, Dixon, Philip, Fiehn, Oliver, Lange, B. Markus, Shulaev, Vladimir, Sumner, Lloyd W., Welti, Ruth, Nikolau, Basil J., Rhee, Seung Y., Dickerson, Julie A.
Pubblicazione 2010