Mass Spectrometer Output File Format mzML

Por Deutsch, Eric W.
Publicado em 2010

The PeptideAtlas Project

Por Deutsch, Eric W.
Publicado em 2010

File Formats Commonly Used in Mass Spectrometry Proteomics

Por Deutsch, Eric W.
Publicado em 2012

PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows

Por Deutsch, Eric W, Lam, Henry, Aebersold, Ruedi
Publicado em 2008

mspecLINE: bridging knowledge of human disease with the proteome

Por Handcock, Jeremy, Deutsch, Eric W, Boyle, John
Publicado em 2010

Mining PeptideAtlas for biomarkers and therapeutics in human disease

Por Killcoyne, Sarah, Deutsch, Eric W., Boyle, John
Publicado no Curr Pharm Des (2012)

Comprehensive de novo structure prediction in a systems-biology context for the archaea Halobacterium sp. NRC-1

Por Bonneau, Richard, Baliga, Nitin S, Deutsch, Eric W, Shannon, Paul, Hood, Leroy
Publicado em 2004

Interfaces to PeptideAtlas: a case study of standard data access systems

Por Killcoyne, Sarah, Handcock, Jeremy, Robinson, Thomas, Deutsch, Eric W., Boyle, John
Publicado em 2012

Combining Results of Multiple Search Engines in Proteomics

Por Shteynberg, David, Nesvizhskii, Alexey I., Moritz, Robert L., Deutsch, Eric W.
Publicado em 2013

Processing Shotgun Proteomics Data on the Amazon Cloud with the Trans-Proteomic Pipeline

Por Slagel, Joseph, Mendoza, Luis, Shteynberg, David, Deutsch, Eric W., Moritz, Robert L.
Publicado no Mol Cell Proteomics (2015)

Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans

Por Malmström, Johan, Beck, Martin, Schmidt, Alexander, Lange, Vinzenz, Deutsch, Eric W., Aebersold, Ruedi
Publicado em 2009

A honey bee (Apis mellifera L.) PeptideAtlas crossing castes and tissues

Por Chan, Queenie WT, Parker, Robert, Sun, Zhi, Deutsch, Eric W, Foster, Leonard J
Publicado em 2011

An open data format for visualization and analysis of cross-linked mass spectrometry results

Por Hoopmann, Michael R., Mendoza, Luis, Deutsch, Eric W., Shteynberg, David, Moritz, Robert L.
Publicado no J Am Soc Mass Spectrom (2016)

Progress in the Chromosome-Centric Human Proteome Project as Highlighted in the Annual Special Issue IV

Por Paik, Young-Ki, Overall, Christopher M., Deutsch, Eric W., Hancock, William S., Omenn, Gilbert S.
Publicado no J Proteome Res (2016)

Progress on the HUPO Draft Human Proteome: 2017 Metrics of the Human Proteome Project

Por Omenn, Gilbert S., Lane, Lydie, Lundberg, Emma K., Overall, Christopher M., Deutsch, Eric W.
Publicado no J Proteome Res (2017)

SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology

Por Marzolf, Bruz, Deutsch, Eric W, Moss, Patrick, Campbell, David, Johnson, Michael H, Galitski, Timothy
Publicado em 2006

Visual proteomics of the human pathogen Leptospira interrogans

Por Beck, Martin, Malmström, Johan A., Lange, Vinzenz, Schmidt, Alexander, Deutsch, Eric W., Aebersold, Ruedi
Publicado em 2009

Using PeptideAtlas, SRMAtlas and PASSEL – Comprehensive Resources for discovery and targeted proteomics

Por Kusebauch, Ulrike, Deutsch, Eric W., Campbell, David S., Sun, Zhi, Farrah, Terry, Moritz, Robert L.
Publicado no Curr Protoc Bioinformatics (2014)

Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics

Por Deutsch, Eric W., Mendoza, Luis, Shteynberg, David, Slagel, Joseph, Sun, Zhi, Moritz, Robert L.
Publicado no Proteomics Clin Appl (2015)

The PeptideAtlas of the Domestic Laying Hen

Por McCord, James, Sun, Zhi, Deutsch, Eric W., Moritz, Robert L., Muddiman, David C.
Publicado no J Proteome Res (2017)