Effect of Repeat Copy Number on Variable-Number Tandem Repeat Mutations in Escherichia coli O157:H7

Por Vogler, Amy J., Keys, Christine, Nemoto, Yoshimi, Colman, Rebecca E., Jay, Zack, Keim, Paul
Publicado em 2006

Phylogenetically typing bacterial strains from partial SNP genotypes observed from direct sequencing of clinical specimen metagenomic data

Por Sahl, Jason W., Schupp, James M., Rasko, David A., Colman, Rebecca E., Foster, Jeffrey T., Keim, Paul
Publicado no Genome Med (2015)

Phylogenetic and genomic diversity in isolates from the globally distributed Acinetobacter baumannii ST25 lineage

Por Sahl, Jason W., Del Franco, Mariateresa, Pournaras, Spyros, Colman, Rebecca E., Karah, Nabil, Dijkshoorn, Lenie, Zarrilli, Raffaele
Publicado no Sci Rep (2015)

Selective isolation of Yersinia pestis from plague-infected fleas

Por Sarovich, Derek S., Colman, Rebecca E., Price, Erin P., Chung, Wai Kwan, Lee, Judy, Schupp, James M., Alexander, James, Keim, Paul, Wagner., David M.
Publicado em 2010

Fine-scale Identification of the Most Likely Source of a Human Plague Infection

Por Colman, Rebecca E., Vogler, Amy J., Lowell, Jennifer L., Gage, Kenneth L., Morway, Christina, Reynolds, Pamela J., Ettestad, Paul, Keim, Paul, Kosoy, Michael Y., Wagner, David M.
Publicado em 2009

Best practices for evaluating single nucleotide variant calling methods for microbial genomics

Por Olson, Nathan D., Lund, Steven P., Colman, Rebecca E., Foster, Jeffrey T., Sahl, Jason W., Schupp, James M., Keim, Paul, Morrow, Jayne B., Salit, Marc L., Zook, Justin M.
Publicado no Front Genet (2015)

Barriers to Optimal Palliative Care of Lung Transplant Candidates

Por Colman, Rebecca E., Curtis, J. Randall, Nelson, Judith E., Efferen, Linda, Hadjiliadis, Denis, Levine, Deborah J., Meyer, Keith C., Padilla, Maria, Strek, Mary, Varkey, Basil, Singer, Lianne G.
Publicado no Chest (2013)

Genomic Characterization of Burkholderia pseudomallei Isolates Selected for Medical Countermeasures Testing: Comparative Genomics Associated with Differential Virulence

Por Sahl, Jason W., Allender, Christopher J., Colman, Rebecca E., Califf, Katy J., Schupp, James M., Currie, Bart J., Van Zandt, Kristopher E., Gelhaus, H. Carl, Keim, Paul, Tuanyok, Apichai
Publicado no PLoS One (2015)

Diverse Burkholderia Species Isolated from Soils in the Southern United States with No Evidence of B. pseudomallei

Por Hall, Carina M., Busch, Joseph D., Shippy, Kenzie, Allender, Christopher J., Kaestli, Mirjam, Mayo, Mark, Sahl, Jason W., Schupp, James M., Colman, Rebecca E., Keim, Paul, Currie, Bart J., Wagner, David M.
Publicado no PLoS One (2015)

Genetic variation at the MHC DRB1 locus is similar across Gunnison's prairie dog (Cynomys gunnisoni) colonies regardless of plague history

Por Cobble, Kacy R., Califf, Katy J., Stone, Nathan E., Shuey, Megan M., Birdsell, Dawn N., Colman, Rebecca E., Schupp, James M., Aziz, Maliha, Van Andel, Roger, Rocke, Tonie E., Wagner, David M., Busch, Joseph D.
Publicado no Ecol Evol (2016)

Rapid Drug Susceptibility Testing of Drug-Resistant Mycobacterium tuberculosis Isolates Directly from Clinical Samples by Use of Amplicon Sequencing: a Proof-of-Concept Study

Por Colman, Rebecca E., Anderson, Julia, Lemmer, Darrin, Lehmkuhl, Erik, Georghiou, Sophia B., Heaton, Hannah, Wiggins, Kristin, Gillece, John D., Schupp, James M., Catanzaro, Donald G., Crudu, Valeriu, Cohen, Ted, Rodwell, Timothy C., Engelthaler, David M.
Publicado no J Clin Microbiol (2016)

Detection of Low-Level Mixed-Population Drug Resistance in Mycobacterium tuberculosis Using High Fidelity Amplicon Sequencing

Por Colman, Rebecca E., Schupp, James M., Hicks, Nathan D., Smith, David E., Buchhagen, Jordan L., Valafar, Faramarz, Crudu, Valeriu, Romancenco, Elena, Noroc, Ecaterina, Jackson, Lynn, Catanzaro, Donald G., Rodwell, Timothy C., Catanzaro, Antonino, Keim, Paul, Engelthaler, David M.
Publicado no PLoS One (2015)

Within-Host Evolution of Burkholderia pseudomallei in Four Cases of Acute Melioidosis

Por Price, Erin P., Hornstra, Heidie M., Limmathurotsakul, Direk, Max, Tamara L., Sarovich, Derek S., Vogler, Amy J., Dale, Julia L., Ginther, Jennifer L., Leadem, Benjamin, Colman, Rebecca E., Foster, Jeffrey T., Tuanyok, Apichai, Wagner, David M., Peacock, Sharon J., Pearson, Talima, Keim, Paul
Publicado em 2010

Comparison of TaqMan PCR Assays for Detection of the Melioidosis Agent Burkholderia pseudomallei in Clinical Specimens

Por Kaestli, Mirjam, Richardson, Leisha J., Colman, Rebecca E., Tuanyok, Apichai, Price, Erin P., Bowers, Jolene R., Mayo, Mark, Kelley, Erin, Seymour, Meagan L., Sarovich, Derek S., Pearson, Talima, Engelthaler, David M., Wagner, David M., Keim, Paul S., Schupp, James M., Currie, Bart J.
Publicado em 2012

The Effects of Signal Erosion and Core Genome Reduction on the Identification of Diagnostic Markers

Por Sahl, Jason W., Vazquez, Adam J., Hall, Carina M., Busch, Joseph D., Tuanyok, Apichai, Mayo, Mark, Schupp, James M., Lummis, Madeline, Pearson, Talima, Shippy, Kenzie, Colman, Rebecca E., Allender, Christopher J., Theobald, Vanessa, Sarovich, Derek S., Price, Erin P., Hutcheson, Alex, Korlach, Jonas, LiPuma, John J., Ladner, Jason, Lovett, Sean, Koroleva, Galina, Palacios, Gustavo, Limmathurotsakul, Direk, Wuthiekanun, Vanaporn, Wongsuwan, Gumphol, Currie, Bart J., Keim, Paul, Wagner, David M.
Publicado no mBio (2016)